RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 PTF1AQ7RTS3 328 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 FAM167BQ9BTA0 163 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 ETNK1Q9HBU6 452 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 KCNK9Q9NPC2 374 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 UBE2TQ9NPD8 197 aaPredicted RBP16.44■□□□□ 0.22
SDF4-207ENST00000494748 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
SDF4-207ENST00000494748 HGSO14964 777 aaPredicted RBP16.43■□□□□ 0.22
SDF4-207ENST00000494748 CLDN3O15551 220 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 MAP3K13O43283 966 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 LACTBP83111 547 aaPredicted RBP16.43■□□□□ 0.22
SDF4-207ENST00000494748 ATP11AP98196 1134 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 MAP2K1Q02750 393 aaPredicted RBP16.43■□□□□ 0.22
SDF4-207ENST00000494748 MOGSQ13724 837 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 PTK6Q13882 451 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 SLC9A9Q8IVB4 645 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 SLC17A8Q8NDX2 589 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 MICAL1Q8TDZ2 1067 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 ANKRD27Q96NW4 1050 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 RNPEPL1Q9HAU8 725 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 DNAJC17Q9NVM6 304 aaKnown RBP16.43■□□□□ 0.22
SDF4-207ENST00000494748 BTAF1O14981 1849 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 FAM13AO94988 1023 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 SNAP25P60880 206 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 SLC7A6OSQ96CW6 309 aaPredicted RBP16.43■□□□□ 0.22
SDF4-207ENST00000494748 PARVGQ9HBI0 331 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 MTUS1Q9ULD2 1270 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 NAALADL1Q9UQQ1 740 aa16.43■□□□□ 0.22
SDF4-207ENST00000494748 MAGEB2O15479 319 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 RPS6KA4O75676 772 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 UPP2O95045 317 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 TPBGLP0DKB5 382 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 ITIH2P19823 946 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 GCAP28676 217 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 TUBP50607 506 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 ITGA8P53708 1063 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 CALCOCO2Q13137 446 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 CMPK2Q5EBM0 449 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 PRUNE1Q86TP1 453 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 PLEKHO2Q8TD55 490 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 TMEM237Q96Q45 408 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 GRID1Q9ULK0 1009 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 UFL1O94874 794 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 ATP5DP30049 168 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 LLGL1Q15334 1064 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 ZNF564Q8TBZ8 553 aaPredicted RBP16.42■□□□□ 0.22
SDF4-207ENST00000494748 NUP85Q9BW27 656 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 ZFATQ9P243 1243 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 STK24Q9Y6E0 443 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 YARSP54577 528 aaKnown RBP16.42■□□□□ 0.22
SDF4-207ENST00000494748 FMO1Q01740 532 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 TAF11Q15544 211 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 ENDOVQ8N8Q3 282 aaKnown RBP16.42■□□□□ 0.22
SDF4-207ENST00000494748 FAM13CQ8NE31 585 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 ATG4AQ8WYN0 398 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 MAML1Q92585 1016 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 SNF8Q96H20 258 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 KLHL14Q9P2G3 628 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 FRMD4BQ9Y2L6 1034 aa16.42■□□□□ 0.22
SDF4-207ENST00000494748 EMSYQ7Z589 1322 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 POTEJP0CG39 1038 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 GZMAP12544 262 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 CALB2P22676 271 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 SIAH1Q8IUQ4 282 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 SPOCK2Q92563 424 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 SAAL1Q96ER3 474 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 WDR18Q9BV38 432 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 CYP39A1Q9NYL5 469 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 TISP43B9A030 160 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 ASMTLO95671 621 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 STX2P32856 288 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 PEX19P40855 299 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 POLGP54098 1239 aaPredicted RBP16.41■□□□□ 0.22
SDF4-207ENST00000494748 SNX1Q13596 522 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 OTOP1Q7RTM1 612 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 FAM71AQ8IYT1 594 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 ZSWIM2Q8NEG5 633 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 DENND1AQ8TEH3 1009 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 KREMEN1Q96MU8 473 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 OSBPL1AQ9BXW6 950 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 TRIM7Q9C029 511 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 ACTL7BQ9Y614 415 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 DPPA5A6NC42 116 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 SYDE2Q5VT97 1194 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 DAW1Q8N136 415 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 KCTD17Q8N5Z5 321 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 GRAMD1AQ96CP6 724 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 DYDC2Q96IM9 177 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 USP20Q9Y2K6 914 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 STARD13Q9Y3M8 1113 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 NUMBLQ9Y6R0 609 aa16.41■□□□□ 0.22
SDF4-207ENST00000494748 ATRNL1Q5VV63 1379 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 EIF4E1BA6NMX2 242 aaKnown RBP16.4■□□□□ 0.22
SDF4-207ENST00000494748 LUC7L3O95232 432 aaKnown RBP16.4■□□□□ 0.22
SDF4-207ENST00000494748 CYP3A4P08684 503 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 BCRP11274 1271 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 ATP4AP20648 1035 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 RWDD2BP57060 319 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 RC3H1Q5TC82 1133 aaKnown RBP16.4■□□□□ 0.22
SDF4-207ENST00000494748 SLC47A2Q86VL8 602 aa16.4■□□□□ 0.22
SDF4-207ENST00000494748 SRRM1Q8IYB3 904 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms