RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 LINC01465Q8N7H1 131 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 EPS8L1Q8TE68 723 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 TCP11Q8WWU5 503 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 ELMO3Q96BJ8 720 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 ZBTB10Q96DT7 871 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 MSTO1Q9BUK6 570 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 CCDC94Q9BW85 323 aaPredicted RBP11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 RNPEPQ9H4A4 650 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 TAS2R14Q9NYV8 317 aa11.48□□□□□ -0.57
PRPF4B-209ENST00000494674 HBP1O60381 514 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 VNN1O95497 513 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 FTCDO95954 541 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 ITGBL1O95965 494 aaPredicted RBP11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 GH1P01241 217 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 GJB1P08034 283 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 ADCYAP1R1P41586 468 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 MXD4Q14582 209 aaPredicted RBP11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 LMBRD2Q68DH5 695 aaPredicted RBP11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 SLFN11Q7Z7L1 901 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 NOP9Q86U38 636 aaKnown RBP11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 PPM1KQ8N3J5 372 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 TPCN2Q8NHX9 752 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 PPTC7Q8NI37 304 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 TATDN2Q93075 761 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 MAML3Q96JK9 1138 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 RPGRIP1Q96KN7 1286 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 NT5C1BQ96P26 610 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 SUGCTQ9HAC7 445 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 FAM53CQ9NYF3 392 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 RBAKQ9NYW8 714 aaPredicted RBP11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 ERAP1Q9NZ08 941 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 ANKFY1Q9P2R3 1169 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 TSKSQ9UJT2 592 aa11.47□□□□□ -0.57
PRPF4B-209ENST00000494674 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 SGPL1O95470 568 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 TMEM253P0C7T8 217 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 HOXD8P13378 290 aaPredicted RBP11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 PROZP22891 400 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 CXCR5P32302 372 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 MFAP3P55082 362 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 GCNT1Q02742 428 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 ITIH3Q06033 890 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 CC2D1AQ6P1N0 951 aaPredicted RBP11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 EXOC8Q8IYI6 725 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 RNF149Q8NC42 400 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 AFG1LQ8WV93 481 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 DHX38Q92620 1227 aaKnown RBP11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 ARHGEF26Q96DR7 871 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 PCDHB18PQ96TA0 734 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 PSMB7Q99436 277 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 CGRRF1Q99675 332 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 ACO2Q99798 780 aaKnown RBP11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 PI4K2AQ9BTU6 479 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 GOLPH3Q9H4A6 298 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 ACP6Q9NPH0 428 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 NMRK2Q9NPI5 230 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 SMARCAL1Q9NZC9 954 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 EHD2Q9NZN4 543 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 TRPC6Q9Y210 931 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 IVNS1ABPQ9Y6Y0 642 aa11.46□□□□□ -0.57
PRPF4B-209ENST00000494674 CYP26A1O43174 497 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 ADCY6O43306 1168 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 TOM1L1O75674 476 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 HLA-DRAP01903 254 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 PRKCBP05771 671 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 SRGAP2CP0DJJ0 459 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 TNFAIP3P21580 790 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 KCNA4P22459 653 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 TNFSF9P41273 254 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 CLCN3P51790 818 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 NAP1L1P55209 391 aaKnown RBP11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 SEZ6Q53EL9 994 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 PLEKHH3Q7Z736 793 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 SLC47A2Q86VL8 602 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 BRSK2Q8IWQ3 736 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 OR5B17Q8NGF7 314 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 NPLOC4Q8TAT6 608 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 RFFLQ8WZ73 363 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 DDX1Q92499 740 aaKnown RBP11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 ARID3AQ99856 593 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 JPH2Q9BR39 696 aaPredicted RBP11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 C16orf70Q9BSU1 422 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 MRPL4Q9BYD3 311 aaKnown RBP11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 ISCUQ9H1K1 167 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 FZD8Q9H461 694 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 PTPRHQ9HD43 1115 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 PACSIN2Q9UNF0 486 aaPredicted RBP11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 STXBP5LQ9Y2K9 1186 aa11.46□□□□□ -0.58
PRPF4B-209ENST00000494674 PCNTO95613 3336 aa11.45□□□□□ -0.58
PRPF4B-209ENST00000494674 CCDC151A5D8V7 595 aa11.45□□□□□ -0.58
PRPF4B-209ENST00000494674 TMCO5BA8MYB1 307 aa11.45□□□□□ -0.58
PRPF4B-209ENST00000494674 IGF2BP3O00425 579 aaKnown RBP eCLIP11.45□□□□□ -0.58
PRPF4B-209ENST00000494674 SEC31AO94979 1220 aaKnown RBP11.45□□□□□ -0.58
PRPF4B-209ENST00000494674 LDHAP00338 332 aaKnown RBP11.45□□□□□ -0.58
PRPF4B-209ENST00000494674 RHOXF2BP0C7M4 288 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms