RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 TSHRP16473 764 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 SMARCA1P28370 1054 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 CCT5P48643 541 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 MEF2AQ02078 507 aaPredicted RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 ICA1Q05084 483 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 PMS2P11Q13670 270 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 DAG1Q14118 895 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 STARD3Q14849 445 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 CNGA2Q16280 664 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 MLANAQ16655 118 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 CCDC38Q502W7 563 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 HIBCHQ6NVY1 386 aaPredicted RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 MPZL3Q6UWV2 235 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 ABHD15Q6UXT9 468 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 DPP8Q6V1X1 898 aaPredicted RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 KRTAP1-3Q8IUG1 177 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 CELF5Q8N6W0 485 aaKnown RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 STPG3Q8N7X2 389 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 TEX19Q8NA77 164 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 HOXB13Q92826 284 aaPredicted RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 INTS4Q96HW7 963 aaKnown RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 FMNL2Q96PY5 1086 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 DMRTA2Q96SC8 542 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 UNKQ9C0B0 810 aaKnown RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 MYLK2Q9H1R3 596 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 EPB41L4AQ9HCS5 686 aaPredicted RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 SARS2Q9NP81 518 aaKnown RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 SAE1Q9UBE0 346 aaPredicted RBP5.06□□□□□ -1.6
CMSS1-207ENST00000494412 PCDHA6Q9UN73 950 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 CEP83Q9Y592 693 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 PCDHA1Q9Y5I3 950 aa5.06□□□□□ -1.6
CMSS1-207ENST00000494412 A0A1W2PR48 441 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 OR14I1A6ND48 311 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 F8W8V4 182 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 DDX3XO00571 662 aaKnown RBP eCLIP5.05□□□□□ -1.6
CMSS1-207ENST00000494412 APOL1O14791 398 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 MAFO75444 373 aaPredicted RBP5.05□□□□□ -1.6
CMSS1-207ENST00000494412 IL18RAPO95256 599 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 C8BP07358 591 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 PARP1P09874 1014 aaKnown RBP5.05□□□□□ -1.6
CMSS1-207ENST00000494412 HARSP12081 509 aaKnown RBP5.05□□□□□ -1.6
CMSS1-207ENST00000494412 HNRNPLP14866 589 aaKnown RBP eCLIP5.05□□□□□ -1.6
CMSS1-207ENST00000494412 NPR1P16066 1061 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 MALP21145 153 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 SLC6A9P48067 706 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 SUMO3P55854 103 aaPredicted RBP5.05□□□□□ -1.6
CMSS1-207ENST00000494412 ZNF200P98182 395 aaPredicted RBP5.05□□□□□ -1.6
CMSS1-207ENST00000494412 FMO1Q01740 532 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 SNAPC2Q13487 334 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 BLMHQ13867 455 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 RAB39AQ14964 217 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 PUM3Q15397 648 aaKnown RBP5.05□□□□□ -1.6
CMSS1-207ENST00000494412 MAN2A1Q16706 1144 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 SLC4A8Q2Y0W8 1093 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 GJC2Q5T442 439 aaPredicted RBP5.05□□□□□ -1.6
CMSS1-207ENST00000494412 KLHDC7AQ5VTJ3 777 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 OGFOD2Q6N063 350 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 PGBD2Q6P3X8 592 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 GGT6Q6P531 493 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 TLDC1Q6P9B6 456 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 CLEC4GQ6UXB4 293 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 MMS22LQ6ZRQ5 1243 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 Q6ZVL8 140 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 OTOP2Q7RTS6 562 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 SESTD1Q86VW0 696 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 SYTL1Q8IYJ3 562 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 PQLC1Q8N2U9 271 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 PPP1R14CQ8TAE6 165 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 ARL8AQ96BM9 186 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 MRGPRX4Q96LA9 322 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 ZSWIM3Q96MP5 696 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 WDR92Q96MX6 357 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 TMEM209Q96SK2 561 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 DIRC2Q96SL1 478 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 PDCD2LQ9BRP1 358 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 LDAHQ9H6V9 325 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 AS3MTQ9HBK9 375 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 SAGE1Q9NXZ1 904 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 CPNE7Q9UBL6 633 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 SIK3Q9Y2K2 1263 aa5.05□□□□□ -1.6
CMSS1-207ENST00000494412 ISM1B1AKI9 464 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 MYO1FO00160 1098 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 N4BP3O15049 544 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 ADAMTS3O15072 1205 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 FGF18O76093 207 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 FSBPO95073 299 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 MAPK9P45984 424 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 CACNB2Q08289 660 aaPredicted RBP5.04□□□□□ -1.6
CMSS1-207ENST00000494412 UBE3CQ15386 1083 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 MST1LQ2TV78 715 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 PRR16Q569H4 304 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 KHDC1LQ5JSQ8 128 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 ZNF648Q5T619 568 aaPredicted RBP5.04□□□□□ -1.6
CMSS1-207ENST00000494412 STK32CQ86UX6 486 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 ZNF527Q8NB42 609 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 PIK3C3Q8NEB9 887 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 IFI44Q8TCB0 444 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 BRIX1Q8TDN6 353 aaKnown RBP5.04□□□□□ -1.6
CMSS1-207ENST00000494412 ZNF480Q8WV37 535 aa5.04□□□□□ -1.6
CMSS1-207ENST00000494412 SNX33Q8WV41 574 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms