RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 CDK5RAP1Q96SZ6 601 aaKnown RBP7.56□□□□□ -1.2
MSL3-217ENST00000494268 GPR20Q99678 358 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 C7orf25Q9BPX7 421 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 KRTAP4-7Q9BYR0 210 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 IP6K2Q9UHH9 426 aa7.56□□□□□ -1.2
MSL3-217ENST00000494268 AJAP1Q9UKB5 411 aaPredicted RBP7.56□□□□□ -1.2
MSL3-217ENST00000494268 CCDC154A6NI56 674 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 ENDOD1O94919 500 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 AMY1AP04745 511 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 ALOX15P16050 662 aaPredicted RBP7.55□□□□□ -1.2
MSL3-217ENST00000494268 FPR1P21462 350 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 GUCY1A2P33402 732 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 SLC16A1P53985 500 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 RRP1BQ14684 758 aaKnown RBP7.55□□□□□ -1.2
MSL3-217ENST00000494268 SPRED1Q7Z699 444 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 ZGPATQ8N5A5 531 aaKnown RBP7.55□□□□□ -1.2
MSL3-217ENST00000494268 SH3RF3Q8TEJ3 882 aaPredicted RBP7.55□□□□□ -1.2
MSL3-217ENST00000494268 MNTQ99583 582 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 GPR87Q9BY21 358 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 SENP6Q9GZR1 1112 aaPredicted RBP7.55□□□□□ -1.2
MSL3-217ENST00000494268 SAP30BPQ9UHR5 308 aaKnown RBP7.55□□□□□ -1.2
MSL3-217ENST00000494268 HDAC5Q9UQL6 1122 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 THRAP3Q9Y2W1 955 aaKnown RBP7.55□□□□□ -1.2
MSL3-217ENST00000494268 GIT1Q9Y2X7 761 aa7.55□□□□□ -1.2
MSL3-217ENST00000494268 TBKBP1A7MCY6 615 aa7.54□□□□□ -1.2
MSL3-217ENST00000494268 FAM171A2A8MVW0 826 aa7.54□□□□□ -1.2
MSL3-217ENST00000494268 IPO13O94829 963 aaKnown RBP7.54□□□□□ -1.2
MSL3-217ENST00000494268 HSP90B1P14625 803 aaKnown RBP7.54□□□□□ -1.2
MSL3-217ENST00000494268 PCSK1P29120 753 aa7.54□□□□□ -1.2
MSL3-217ENST00000494268 RAB27AP51159 221 aa7.54□□□□□ -1.2
MSL3-217ENST00000494268 ADKP55263 362 aaKnown RBP7.54□□□□□ -1.2
MSL3-217ENST00000494268 USP39Q53GS9 565 aaKnown RBP7.54□□□□□ -1.2
MSL3-217ENST00000494268 AFMIDQ63HM1 303 aa7.54□□□□□ -1.2
MSL3-217ENST00000494268 GPRIN1Q7Z2K8 1008 aa7.54□□□□□ -1.2
MSL3-217ENST00000494268 OR52N2Q8NGI0 321 aa7.54□□□□□ -1.2
MSL3-217ENST00000494268 SPON1Q9HCB6 807 aa7.54□□□□□ -1.2
MSL3-217ENST00000494268 LANCL2Q9NS86 450 aa7.54□□□□□ -1.2
MSL3-217ENST00000494268 XDHP47989 1333 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 PNPLA7Q6ZV29 1317 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 KRTAP23-1A1A580 65 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 KLRG2A4D1S0 409 aaPredicted RBP7.53□□□□□ -1.2
MSL3-217ENST00000494268 CXorf49A8MYA2 514 aaPredicted RBP7.53□□□□□ -1.2
MSL3-217ENST00000494268 CYP27B1O15528 508 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 ACRV1P26436 265 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 FLT3LGP49771 235 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 CRHR2Q13324 411 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 BMT2Q1RMZ1 405 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 DOK3Q7L591 496 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 IL17DQ8TAD2 202 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 KAT5Q92993 513 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 HDAC10Q969S8 669 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 MYOCQ99972 504 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 ACTL7AQ9Y615 435 aa7.53□□□□□ -1.2
MSL3-217ENST00000494268 AKAP10O43572 662 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 INSRRP14616 1297 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 MAN2A2P49641 1150 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 SP140Q13342 867 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 CNGB1Q14028 1251 aaPredicted RBP7.52□□□□□ -1.21
MSL3-217ENST00000494268 NRN1LQ496H8 165 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 TMEM240Q5SV17 173 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 ODR4Q5SWX8 454 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 GJC2Q5T442 439 aaPredicted RBP7.52□□□□□ -1.21
MSL3-217ENST00000494268 C1orf210Q8IVY1 113 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 MIER2Q8N344 545 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 RNF169Q8NCN4 708 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 PCDHB1Q9Y5F3 818 aa7.52□□□□□ -1.21
MSL3-217ENST00000494268 MYBBP1AQ9BQG0 1328 aaKnown RBP7.52□□□□□ -1.21
MSL3-217ENST00000494268 PRR5-ARHGAP8B1AHC4 643 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 B5MCH6 92 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 C1QTNF3-AMACRE9PGA6 284 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 ABLIM3O94929 683 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 IL33O95760 270 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 RAP2AP10114 183 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 IL2RBP14784 551 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 DDCP20711 480 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 ALDH1A3P47895 512 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 ATP8B2P98198 1209 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 TARDBPQ13148 414 aaKnown RBP eCLIP7.51□□□□□ -1.21
MSL3-217ENST00000494268 VPS72Q15906 364 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 HTR3DQ70Z44 454 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 MIGA2Q7L4E1 593 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 SYT12Q8IV01 421 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 HSPBAP1Q96EW2 488 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 CYFIP2Q96F07 1278 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 MRI1Q9BV20 369 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 MANSC1Q9H8J5 431 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 TCF7L1Q9HCS4 588 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 TMEM140Q9NV12 185 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 SLC23A1Q9UHI7 598 aa7.51□□□□□ -1.21
MSL3-217ENST00000494268 RUVBL1Q9Y265 456 aaKnown RBP7.51□□□□□ -1.21
MSL3-217ENST00000494268 PPM1GO15355 546 aaPredicted RBP7.5□□□□□ -1.21
MSL3-217ENST00000494268 GPR32O75388 356 aa7.5□□□□□ -1.21
MSL3-217ENST00000494268 PF4V1P10720 104 aa7.5□□□□□ -1.21
MSL3-217ENST00000494268 ZSCAN20P17040 1043 aaPredicted RBP7.5□□□□□ -1.21
MSL3-217ENST00000494268 PDCP20941 246 aa7.5□□□□□ -1.21
MSL3-217ENST00000494268 FXR1P51114 621 aaKnown RBP eCLIP7.5□□□□□ -1.21
MSL3-217ENST00000494268 MTM1Q13496 603 aa7.5□□□□□ -1.21
MSL3-217ENST00000494268 TMPRSS6Q8IU80 811 aa7.5□□□□□ -1.21
MSL3-217ENST00000494268 TFAP2CQ92754 450 aa7.5□□□□□ -1.21
MSL3-217ENST00000494268 RTFDC1Q9BY42 306 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms