RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 ABHD15Q6UXT9 468 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 RSPH3Q86UC2 560 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 C1orf210Q8IVY1 113 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 GPR135Q8IZ08 494 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 MSL3Q8N5Y2 521 aaKnown RBP3.09□□□□□ -1.91
LMNB1-207ENST00000494185 PPM1NQ8N819 430 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 MB21D1Q8N884 522 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 NLGN4YQ8NFZ3 816 aaPredicted RBP3.09□□□□□ -1.91
LMNB1-207ENST00000494185 SH3RF3Q8TEJ3 882 aaPredicted RBP3.09□□□□□ -1.91
LMNB1-207ENST00000494185 JDP2Q8WYK2 163 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 RIN2Q8WYP3 895 aaPredicted RBP3.09□□□□□ -1.91
LMNB1-207ENST00000494185 HOOK2Q96ED9 719 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 GPHA2Q96T91 129 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 PTPN18Q99952 460 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 SSBP3Q9BWW4 388 aaPredicted RBP3.09□□□□□ -1.91
LMNB1-207ENST00000494185 ZNF341Q9BYN7 854 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 CD248Q9HCU0 757 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 GEMIN8Q9NWZ8 242 aaKnown RBP3.09□□□□□ -1.91
LMNB1-207ENST00000494185 ING3Q9NXR8 418 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 SRRDQ9UH36 339 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 EIF2B4Q9UI10 523 aaKnown RBP3.09□□□□□ -1.91
LMNB1-207ENST00000494185 SCOCQ9UIL1 159 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 DNM3Q9UQ16 869 aa3.09□□□□□ -1.91
LMNB1-207ENST00000494185 KRTAP23-1A1A580 65 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 GAGE12BA1L429 117 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 GAGE12HA6NDE8 117 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 HOXA3O43365 443 aaPredicted RBP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 SGTAO43765 313 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 FZD7O75084 574 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 GPR32O75388 356 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 IL33O95760 270 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 ADH4P08319 380 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 GSPT1P15170 499 aaKnown RBP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 MAKP20794 623 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 ADSLP30566 484 aaPredicted RBP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 MCAMP43121 646 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 ADKP55263 362 aaKnown RBP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 ADAM8P78325 824 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 BLOC1S1P78537 153 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 KIF23Q02241 960 aaPredicted RBP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 ABHD18Q0P651 414 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 FOXL1Q12952 345 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 MRPL49Q13405 166 aaKnown RBP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 SAFB2Q14151 953 aaKnown RBP eCLIP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 NOMO1Q15155 1222 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 USP39Q53GS9 565 aaKnown RBP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 DRICH1Q6PGQ1 229 aaPredicted RBP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 GADL1Q6ZQY3 521 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 RNF207Q6ZRF8 634 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 PLXDC1Q8IUK5 500 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 PQLC1Q8N2U9 271 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 CPA6Q8N4T0 437 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 TFAP2CQ92754 450 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 PLEKHG4BQ96PX9 1271 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 POLR3GLQ9BT43 218 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 KRTAP9-8Q9BYQ0 159 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 SIK2Q9H0K1 926 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 VPS11Q9H270 941 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 SPON1Q9HCB6 807 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 DMRT3Q9NQL9 472 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 TDP1Q9NUW8 608 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 POGKQ9P215 609 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 IP6K2Q9UHH9 426 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 TCEAL9Q9UHQ7 104 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 TUBD1Q9UJT1 453 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 JAG2Q9Y219 1238 aa3.08□□□□□ -1.92
LMNB1-207ENST00000494185 REXO2Q9Y3B8 237 aaKnown RBP3.08□□□□□ -1.92
LMNB1-207ENST00000494185 CCDC194A0A1B0GVG4 234 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 PLEKHD1A6NEE1 506 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 SLC16A6O15403 523 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 AKAP10O43572 662 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ABLIM3O94929 683 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 GNAI3P08754 354 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 RAP2AP10114 183 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ZSCAN20P17040 1043 aaPredicted RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ATP5JP18859 108 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 CASRP41180 1078 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 IL12RB1P42701 662 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 WASP42768 502 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 RAB27AP51159 221 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 CLRN1P58418 232 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 GNAI1P63096 354 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 SATB1Q01826 763 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 PPP3CAQ08209 521 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 DUSP8Q13202 625 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 PUM1Q14671 1186 aaKnown RBP eCLIP3.07□□□□□ -1.921e-8■□□□□ 9.5
LMNB1-207ENST00000494185 RAB39AQ14964 217 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ODF1Q14990 250 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 UAP1L1Q3KQV9 507 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 FAM47AQ5JRC9 791 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 SPDYAQ5MJ70 313 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 NAIF1Q69YI7 327 aaPredicted RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 FOXR2Q6PJQ5 311 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 TMPRSS6Q8IU80 811 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 CMTR2Q8IYT2 770 aaKnown RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 ZNF808Q8N4W9 903 aaPredicted RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 NRG4Q8WWG1 115 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 MTFMTQ96DP5 389 aaKnown RBP3.07□□□□□ -1.92
LMNB1-207ENST00000494185 HSPBAP1Q96EW2 488 aa3.07□□□□□ -1.92
LMNB1-207ENST00000494185 NUP88Q99567 741 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms