RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SEC31AO94979 1220 aaKnown RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 VNN1O95497 513 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 GH1P01241 217 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 HLA-DRAP01903 254 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 RHOXF2BP0C7M4 288 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 CHRNB2P17787 502 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 PIK3CAP42336 1068 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 CLCN3P51790 818 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 GALCP54803 685 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 TUBB4BP68371 445 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 LAMTOR4Q0VGL1 99 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 BRD3Q15059 726 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 TDRD10Q5VZ19 366 aaKnown RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 SLFN12LQ6IEE8 588 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 CC2D1AQ6P1N0 951 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 TMCO3Q6UWJ1 677 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 NOP9Q86U38 636 aaKnown RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 RASAL3Q86YV0 1011 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 ZBTB8OSQ8IWT0 167 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 PPM1KQ8N3J5 372 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 LINC01465Q8N7H1 131 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 PRPF31Q8WWY3 499 aaKnown RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 DHX38Q92620 1227 aaKnown RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 EMID1Q96A84 441 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 ARHGEF26Q96DR7 871 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 PSMB7Q99436 277 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 RHOXF2Q9BQY4 288 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 JPH2Q9BR39 696 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 MSTO1Q9BUK6 570 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 MRPL4Q9BYD3 311 aaKnown RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 C2orf40Q9H1Z8 148 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 SMARCAD1Q9H4L7 1026 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 GPBP1L1Q9HC44 474 aaPredicted RBP11.5□□□□□ -0.57
CLCN6-208ENST00000494028 RAB20Q9NX57 234 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 TAS2R14Q9NYV8 317 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 SMARCAL1Q9NZC9 954 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 COL1A2P08123 1366 aa11.5□□□□□ -0.57
CLCN6-208ENST00000494028 DOCK3Q8IZD9 2030 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-208ENST00000494028 KIF4AO95239 1232 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 SGPL1O95470 568 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 C4BPAP04003 597 aaKnown RBP11.49□□□□□ -0.57
CLCN6-208ENST00000494028 ZNF286BP0CG31 522 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 HARSP12081 509 aaKnown RBP11.49□□□□□ -0.57
CLCN6-208ENST00000494028 TNFAIP3P21580 790 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 ADCYAP1R1P41586 468 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 ACOT2P49753 483 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 EFNA5P52803 228 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 MFAP3P55082 362 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 NAP1L1P55209 391 aaKnown RBP11.49□□□□□ -0.57
CLCN6-208ENST00000494028 VSNL1P62760 191 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 FMO1Q01740 532 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 GCNT1Q02742 428 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 IFI16Q16666 785 aaKnown RBP11.49□□□□□ -0.57
CLCN6-208ENST00000494028 SLFN11Q7Z7L1 901 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 EXOC8Q8IYI6 725 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 RPUSD2Q8IZ73 545 aaKnown RBP11.49□□□□□ -0.57
CLCN6-208ENST00000494028 C2orf69Q8N8R5 385 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 RNF149Q8NC42 400 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 PPTC7Q8NI37 304 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 ELMO3Q96BJ8 720 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 ZBTB10Q96DT7 871 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 MAML3Q96JK9 1138 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 PTPN18Q99952 460 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 PI4K2AQ9BTU6 479 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 GOLPH3Q9H4A6 298 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 PDE11AQ9HCR9 933 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 C1orf112Q9NSG2 853 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 FAM53CQ9NYF3 392 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 PACSIN2Q9UNF0 486 aaPredicted RBP11.49□□□□□ -0.57
CLCN6-208ENST00000494028 STXBP5LQ9Y2K9 1186 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 IVNS1ABPQ9Y6Y0 642 aa11.49□□□□□ -0.57
CLCN6-208ENST00000494028 CITO14578 2027 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 TMCO5BA8MYB1 307 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 CES2O00748 559 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 SNAI1O95863 264 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-208ENST00000494028 ITGBL1O95965 494 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-208ENST00000494028 LDHAP00338 332 aaKnown RBP11.48□□□□□ -0.57
CLCN6-208ENST00000494028 HOXD8P13378 290 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-208ENST00000494028 PROZP22891 400 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 CXCR5P32302 372 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 TNFSF9P41273 254 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 PDE6CP51160 858 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 MBTD1Q05BQ5 628 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 MCL1Q07820 350 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 LAMC2Q13753 1193 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 MXD4Q14582 209 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-208ENST00000494028 WDR93Q6P2C0 686 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 ENOSF1Q7L5Y1 443 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 PLEKHH3Q7Z736 793 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 MMGT1Q8N4V1 131 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 NPLOC4Q8TAT6 608 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 AFG1LQ8WV93 481 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 CTNNBL1Q8WYA6 563 aaPredicted RBP11.48□□□□□ -0.57
CLCN6-208ENST00000494028 TATDN2Q93075 761 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 NLRP4Q96MN2 994 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 FNBP1Q96RU3 617 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 PCDHB18PQ96TA0 734 aa11.48□□□□□ -0.57
CLCN6-208ENST00000494028 ACO2Q99798 780 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms