RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 DHX8Q14562 1220 aaKnown RBP12.48□□□□□ -0.41
BRCA1-222ENST00000493919 CFAP157Q5JU67 520 aa12.48□□□□□ -0.41
BRCA1-222ENST00000493919 FAM117BQ6P1L5 589 aa12.48□□□□□ -0.41
BRCA1-222ENST00000493919 GDAP1Q8TB36 358 aa12.48□□□□□ -0.41
BRCA1-222ENST00000493919 INTS4Q96HW7 963 aaKnown RBP12.48□□□□□ -0.41
BRCA1-222ENST00000493919 SDF4Q9BRK5 362 aa12.48□□□□□ -0.41
BRCA1-222ENST00000493919 ZNF577Q9BSK1 485 aa12.48□□□□□ -0.41
BRCA1-222ENST00000493919 PARVGQ9HBI0 331 aa12.48□□□□□ -0.41
BRCA1-222ENST00000493919 KLC4Q9NSK0 619 aa12.48□□□□□ -0.41
BRCA1-222ENST00000493919 NDUFB5O43674 189 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 ZNF286BP0CG31 522 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 ITGB3BPQ13352 177 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 NIPA1Q7RTP0 329 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 LRRC43Q8N309 656 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 RNF10Q8N5U6 811 aaKnown RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 GIMAP8Q8ND71 665 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 TNIP2Q8NFZ5 429 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 PPTC7Q8NI37 304 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 PPP1R14CQ8TAE6 165 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 EMID1Q96A84 441 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 SPAG5Q96R06 1193 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 NR1H4Q96RI1 486 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 TSEN34Q9BSV6 310 aaKnown RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 IER2Q9BTL4 223 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 FOXP1Q9H334 677 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 L2HGDHQ9H9P8 463 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 AGO4Q9HCK5 861 aaKnown RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 JPH1Q9HDC5 661 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 CASS4Q9NQ75 786 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 AASDHPPTQ9NRN7 309 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 POLR3EQ9NVU0 708 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 GALNT8Q9NY28 637 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 TCEAL9Q9UHQ7 104 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 DNAI1Q9UI46 699 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 FAM169AQ9Y6X4 670 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 CCDC162PA2VCL2 907 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 SLC37A4O43826 429 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 EDIL3O43854 480 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 AKR1B10O60218 316 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 CIITAP33076 1130 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 PSMC6P62333 389 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 TUBA4AP68366 448 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 IFFO1Q0D2I5 559 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 SNCBQ16143 134 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 DGKDQ16760 1214 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 TRIM71Q2Q1W2 868 aaKnown RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 CCDC121Q6ZUS5 278 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 NOSTRINQ8IVI9 506 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 CCDC89Q8N998 374 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 LILRB1Q8NHL6 650 aaPredicted RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 LENG9Q96B70 501 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 ZNF653Q96CK0 615 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 HTATIP2Q9BUP3 242 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 SEMA4AQ9H3S1 761 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 CLK4Q9HAZ1 481 aaKnown RBP12.47□□□□□ -0.41
BRCA1-222ENST00000493919 TELO2Q9Y4R8 837 aa12.47□□□□□ -0.41
BRCA1-222ENST00000493919 ZSCAN12O43309 604 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 CD9P21926 228 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 HOXC13P31276 330 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 ARHGAP25P42331 645 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 NKX3-2P78367 333 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 PURAQ00577 322 aaKnown RBP12.46□□□□□ -0.42
BRCA1-222ENST00000493919 TMCO5AQ8N6Q1 288 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 PPP1R13LQ8WUF5 828 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 GJA10Q969M2 543 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 C16orf45Q96MC5 204 aaPredicted RBP12.46□□□□□ -0.42
BRCA1-222ENST00000493919 YIPF3Q9GZM5 350 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 STIM2Q9P246 746 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 SLC9A2Q9UBY0 812 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 TRPC6Q9Y210 931 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 ATP11BQ9Y2G3 1177 aa12.46□□□□□ -0.42
BRCA1-222ENST00000493919 SYCE3A1L190 88 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 FRMD3A2A2Y4 597 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 GTPBP10A4D1E9 387 aaKnown RBP12.45□□□□□ -0.42
BRCA1-222ENST00000493919 MSH4O15457 936 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 CHMP2AO43633 222 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 TSPAN1O60635 241 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 GFPT2O94808 682 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 ATG7O95352 703 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 PDCP20941 246 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 MLLT1Q03111 559 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-222ENST00000493919 LRRC26Q2I0M4 334 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 CCDC153Q494R4 210 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 FAM47CQ5HY64 1035 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 BEND6Q5SZJ8 279 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-222ENST00000493919 MOXD1Q6UVY6 613 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 BEND5Q7L4P6 421 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 TRIM50Q86XT4 487 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 RASSF8Q8NHQ8 419 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 C1orf74Q96LT6 269 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 CCT7Q99832 543 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 MTG1Q9BT17 334 aaPredicted RBP12.45□□□□□ -0.42
BRCA1-222ENST00000493919 SH3GLB1Q9Y371 365 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 ALPK3Q96L96 1907 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 NFASCO94856 1347 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 M0QX08 132 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 WNT7AO00755 349 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 BIRC5O15392 142 aa12.45□□□□□ -0.42
BRCA1-222ENST00000493919 CABYRO75952 493 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms