RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 RALGPS1Q5JS13 557 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 SESTD1Q86VW0 696 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 MIB1Q86YT6 1006 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 RHOT1Q8IXI2 618 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 FAM126BQ8IXS8 530 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 COLGALT2Q8IYK4 626 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 IGDCC4Q8TDY8 1250 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 USP13Q92995 863 aaPredicted RBP5.28□□□□□ -1.56
GTF3A-208ENST00000493903 CYFIP2Q96F07 1278 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 TSPAN17Q96FV3 270 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 MRGPRX4Q96LA9 322 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 UBXN10Q96LJ8 280 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 DMRTA2Q96SC8 542 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 RMDN3Q96TC7 470 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 BRIP1Q9BX63 1249 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 EIF2AQ9BY44 585 aaKnown RBP5.28□□□□□ -1.56
GTF3A-208ENST00000493903 STK33Q9BYT3 514 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 OR10A5Q9H207 317 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 UNC45AQ9H3U1 944 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 WDCPQ9H6R7 721 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 SARS2Q9NP81 518 aaKnown RBP5.28□□□□□ -1.56
GTF3A-208ENST00000493903 TNFRSF12AQ9NP84 129 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 SERHLQ9NQF3 203 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 RASSF1Q9NS23 344 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 MBNL3Q9NUK0 354 aaKnown RBP5.28□□□□□ -1.56
GTF3A-208ENST00000493903 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.28□□□□□ -1.56
GTF3A-208ENST00000493903 PIH1D1Q9NWS0 290 aaKnown RBP5.28□□□□□ -1.56
GTF3A-208ENST00000493903 RRN3Q9NYV6 651 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 FEZ2Q9UHY8 353 aaPredicted RBP5.28□□□□□ -1.56
GTF3A-208ENST00000493903 SLC4A7Q9Y6M7 1214 aa5.28□□□□□ -1.56
GTF3A-208ENST00000493903 HNRNPDLO14979 420 aaKnown RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 TIMM44O43615 452 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 RHOBTB3O94955 611 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 LRG1P02750 347 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 RNASE1P07998 156 aaKnown RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 HARSP12081 509 aaKnown RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 TAL1P17542 331 aaPredicted RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 EEF1GP26641 437 aaKnown RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 PDIA3P30101 505 aaKnown RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 MAP3K12Q12852 859 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 KCTD2Q14681 263 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 NR1I3Q14994 352 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 STILQ15468 1287 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 MAN2A1Q16706 1144 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 DGKDQ16760 1214 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 SLC35G1Q2M3R5 365 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 KHDC1Q4VXA5 237 aaKnown RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 MCTP1Q6DN14 999 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 MAATS1Q7Z4T9 603 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 NLRX1Q86UT6 975 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 LIX1LQ8IVB5 337 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 LILRA2Q8N149 483 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 MSL3Q8N5Y2 521 aaKnown RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 ATP11CQ8NB49 1132 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 WDR48Q8TAF3 677 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 KBTBD7Q8WVZ9 684 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 EIF2AK1Q9BQI3 630 aaKnown RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 FDXACB1Q9BRP7 624 aaPredicted RBP5.27□□□□□ -1.57
GTF3A-208ENST00000493903 OSBPL6Q9BZF3 934 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 SLC39A2Q9NP94 309 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 MYO1AQ9UBC5 1043 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 ABCF2Q9UG63 623 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 STAP2Q9UGK3 403 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 PCDHA3Q9Y5H8 950 aa5.27□□□□□ -1.57
GTF3A-208ENST00000493903 ITIH6Q6UXX5 1313 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 A0A1W2PR48 441 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 LRRC14BA6NHZ5 514 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 F8W8V4 182 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 IRAK2O43187 625 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 AKR1B10O60218 316 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 RNASEH2AO75792 299 aaKnown RBP5.26□□□□□ -1.57
GTF3A-208ENST00000493903 KITP10721 976 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 NPR1P16066 1061 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 TNFAIP3P21580 790 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 RXRGP48443 463 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 SUMO3P55854 103 aaPredicted RBP5.26□□□□□ -1.57
GTF3A-208ENST00000493903 MGAT5Q09328 741 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 PRKG1Q13976 671 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 KIR3DS1Q14943 382 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 SLC23A3Q6PIS1 610 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 TEPPQ6URK8 271 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 LRSAM1Q6UWE0 723 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 RSRC2Q7L4I2 434 aaKnown RBP5.26□□□□□ -1.57
GTF3A-208ENST00000493903 BEND5Q7L4P6 421 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 CXXC5Q7LFL8 322 aaKnown RBP5.26□□□□□ -1.57
GTF3A-208ENST00000493903 FANCBQ8NB91 859 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 OR5AN1Q8NGI8 311 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 BRIX1Q8TDN6 353 aaKnown RBP5.26□□□□□ -1.57
GTF3A-208ENST00000493903 ZNF566Q969W8 418 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 NMD3Q96D46 503 aaKnown RBP5.26□□□□□ -1.57
GTF3A-208ENST00000493903 TM7SF3Q9NS93 570 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 AFF4Q9UHB7 1163 aaKnown RBP5.26□□□□□ -1.57
GTF3A-208ENST00000493903 PAXBP1Q9Y5B6 917 aa5.26□□□□□ -1.57
GTF3A-208ENST00000493903 A0A0A6YYK5 440 aaPredicted RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 ZC3H12DA2A288 527 aaKnown RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 F8W031 263 aaPredicted RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 TMEM127O75204 238 aa5.25□□□□□ -1.57
GTF3A-208ENST00000493903 LTA4HP09960 611 aaKnown RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 VEGFAP15692 232 aaPredicted RBP5.25□□□□□ -1.57
GTF3A-208ENST00000493903 MALP21145 153 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms