RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GPD1LQ8N335 351 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 SLC20A1Q8WUM9 679 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 CTNNBL1Q8WYA6 563 aaPredicted RBP14.84□□□□□ -0.03
VCP-207ENST00000493886 RFFLQ8WZ73 363 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 CAPS2Q9BXY5 557 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.84□□□□□ -0.034e-7■■■□□ 16.1
VCP-207ENST00000493886 TOPORSQ9NS56 1045 aaPredicted RBP14.84□□□□□ -0.03
VCP-207ENST00000493886 TAS2R14Q9NYV8 317 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 COQ4Q9Y3A0 265 aa14.84□□□□□ -0.03
VCP-207ENST00000493886 ABCB4P21439 1286 aa14.83□□□□□ -0.03
VCP-207ENST00000493886 PEX26Q7Z412 305 aa14.83□□□□□ -0.03
VCP-207ENST00000493886 SYCE1Q8N0S2 351 aa14.83□□□□□ -0.03
VCP-207ENST00000493886 PPM1KQ8N3J5 372 aa14.83□□□□□ -0.03
VCP-207ENST00000493886 BCAS4Q8TDM0 211 aa14.83□□□□□ -0.03
VCP-207ENST00000493886 ITFG2Q969R8 447 aa14.83□□□□□ -0.03
VCP-207ENST00000493886 TMEM143Q96AN5 459 aa14.83□□□□□ -0.03
VCP-207ENST00000493886 ASCC2Q9H1I8 757 aaPredicted RBP14.83□□□□□ -0.03
VCP-207ENST00000493886 IGKV6D-21A0A0A0MT36 114 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 ABCD1P33897 745 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 USP8P40818 1118 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 DAAM2Q86T65 1068 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 USP37Q86T82 979 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 ANKRD13AQ8IZ07 590 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 SLC35G2Q8TBE7 412 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 PBKQ96KB5 322 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 KREMEN1Q96MU8 473 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 DHX33Q9H6R0 707 aaKnown RBP14.83□□□□□ -0.04
VCP-207ENST00000493886 OSGEPQ9NPF4 335 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 RPS6KL1Q9Y6S9 549 aa14.83□□□□□ -0.04
VCP-207ENST00000493886 CXCL11O14625 94 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 FARP2O94887 1054 aaPredicted RBP14.82□□□□□ -0.04
VCP-207ENST00000493886 GLE1Q53GS7 698 aaKnown RBP14.82□□□□□ -0.04
VCP-207ENST00000493886 MOB2Q70IA6 237 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 CENPHQ9H3R5 247 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 STXBP5LQ9Y2K9 1186 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 GSTTP1A0A1W2PQM5 241 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 ANKRD62A6NC57 917 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 ZEB2O60315 1214 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 CNMDO75829 334 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 GTF2H1P32780 548 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 GPC3P51654 580 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 MFAP3P55082 362 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 FAM71AQ8IYT1 594 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 FBXL13Q8NEE6 735 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 ASAP3Q8TDY4 903 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 PCYT2Q99447 389 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 FAM213AQ9BRX8 229 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 NIFKQ9BYG3 293 aaKnown RBP14.82□□□□□ -0.04
VCP-207ENST00000493886 PORCNQ9H237 461 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 SUCLA2Q9P2R7 463 aaPredicted RBP14.82□□□□□ -0.04
VCP-207ENST00000493886 SPDYE5A6NIY4 337 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 DLATP10515 647 aaKnown RBP14.82□□□□□ -0.04
VCP-207ENST00000493886 LIG4P49917 911 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 NEDD9Q14511 834 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 EMBQ6PCB8 327 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 NT5DC3Q86UY8 548 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 RPUSD2Q8IZ73 545 aaKnown RBP14.82□□□□□ -0.04
VCP-207ENST00000493886 USP38Q8NB14 1042 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 TAS1R2Q8TE23 839 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 CASKIN2Q8WXE0 1202 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 ARHGEF26Q96DR7 871 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 CDCA5Q96FF9 252 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 THAP2Q9H0W7 228 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 R3HDMLQ9H3Y0 253 aa14.82□□□□□ -0.04
VCP-207ENST00000493886 BUB1BO60566 1050 aaPredicted RBP14.81□□□□□ -0.04
VCP-207ENST00000493886 ZBTB48P10074 688 aaPredicted RBP14.81□□□□□ -0.04
VCP-207ENST00000493886 GLRA2P23416 452 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 NF2P35240 595 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 ENPEPQ07075 957 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 STRN3Q13033 797 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 TTLL12Q14166 644 aaPredicted RBP14.81□□□□□ -0.04
VCP-207ENST00000493886 HLTFQ14527 1009 aaKnown RBP eCLIP14.81□□□□□ -0.04
VCP-207ENST00000493886 SV2AQ7L0J3 742 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 METTL13Q8N6R0 699 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 HELQQ8TDG4 1101 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 SLC7A3Q8WY07 619 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 SHC3Q92529 594 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 NT5C1BQ96P26 610 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 CEP89Q96ST8 783 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 AP1M1Q9BXS5 423 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 RAB20Q9NX57 234 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 GRIN2DO15399 1336 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 ZNF233A6NK53 670 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 RAD51CO43502 376 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 CEP104O60308 925 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 SGPL1O95470 568 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 ARL2P36404 184 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 PPFIA1Q13136 1202 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 C9orf131Q5VYM1 1079 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 EEPD1Q7L9B9 569 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 IFT20Q8IY31 132 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 EPS8L1Q8TE68 723 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 AMFRQ9UKV5 643 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 AGTPBP1Q9UPW5 1226 aa14.81□□□□□ -0.04
VCP-207ENST00000493886 LRRIQ4A6NIV6 560 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 CYP26A1O43174 497 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 EXTL3O43909 919 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 TGFB3P10600 412 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 NAMPTP43490 491 aa14.8□□□□□ -0.04
VCP-207ENST00000493886 NNTQ13423 1086 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms