RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 TRPC6Q9Y210 931 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 FRMD4BQ9Y2L6 1034 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 MRFAP1Q9Y605 127 aa7.82□□□□□ -1.16
SMARCE1-211ENST00000493660 IGKV6-21A0A0C4DH24 114 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 GOLGA6L7A0A1B0GV03 622 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TRIM49BA6NDI0 452 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 LRRC10BA6NIK2 292 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 GPR25O00155 361 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 KPNA6O60684 536 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 N4BP1O75113 896 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 RNF40O75150 1001 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TRPA1O75762 1119 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 GNA14O95837 355 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 SERPINC1P01008 464 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 MYBP10242 640 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 ARL2P36404 184 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 CPT1AP50416 773 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 CASP5P51878 434 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 SESN3P58005 492 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 GTF2BQ00403 316 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 FKBP3Q00688 224 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 PRKCZQ05513 592 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 ACTN3Q08043 901 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 USP4Q13107 963 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 DMP1Q13316 513 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 CUL3Q13618 768 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 ARID5BQ14865 1188 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 LRRC41Q15345 812 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 BRDTQ58F21 947 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TCP11X2Q5H9J9 407 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TMEM63BQ5T3F8 832 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 FAM102BQ5T8I3 360 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 CCDC80Q76M96 950 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 GET4Q7L5D6 327 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TLK2Q86UE8 772 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 LSM14AQ8ND56 463 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 GLIS3Q8NEA6 775 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 IFT74Q96LB3 600 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 SPAG5Q96R06 1193 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 FGFBP2Q9BYJ0 223 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 AP5M1Q9H0R1 490 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TSPYL2Q9H2G4 693 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TMEM206Q9H813 350 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 ACTR5Q9H9F9 607 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TMEM165Q9HC07 324 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 DNAAF2Q9NVR5 837 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 SPATA7Q9P0W8 599 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 GGA2Q9UJY4 613 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 GABRQQ9UN88 632 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 A0A1B0GTH6 734 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 SFI1A8K8P3 1242 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 KCNJ18B7U540 433 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 K7ENM7 598 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 MAGEB2O15479 319 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 FKTNO75072 461 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 DUSP11O75319 330 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 PRPF6O94906 941 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 ATP1A3P13637 1013 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 NMT1P30419 496 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 UBASH3AP57075 661 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 IFT88Q13099 833 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 PPFIA1Q13136 1202 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 PRPF4BQ13523 1007 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 KCNJ12Q14500 433 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 GJC2Q5T442 439 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 IER5Q5VY09 327 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TRIM65Q6PJ69 517 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 LRRC55Q6ZSA7 311 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 APTXQ7Z2E3 356 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 NME8Q8N427 588 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TRIB2Q92519 343 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 ACCSQ96QU6 501 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 C16orf70Q9BSU1 422 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 POLR3FQ9H1D9 316 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 UPF3AQ9H1J1 476 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 SLC40A1Q9NP59 571 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 PAPOLBQ9NRJ5 636 aaKnown RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 IFNKQ9P0W0 207 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 EXOC7Q9UPT5 735 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 WDR37Q9Y2I8 494 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 TMEM98Q9Y2Y6 226 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 ZMYM2Q9UBW7 1377 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 EVPLQ92817 2033 aa7.81□□□□□ -1.16
SMARCE1-211ENST00000493660 ZBTB42B2RXF5 422 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 F8VZ95 297 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 ADCY6O43306 1168 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 ZSCAN12O43309 604 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 RPL13P26373 211 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 HOXD13P35453 343 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 NAMPTP43490 491 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 NPTX2P47972 431 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 IRAK1P51617 712 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 MARSP56192 900 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 PEX3P56589 373 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 DYNC1I2Q13409 638 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 CASP8Q14790 479 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 PRAMEF19Q5SWL8 479 aa7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 BZW1Q7L1Q6 419 aaKnown RBP7.8□□□□□ -1.16
SMARCE1-211ENST00000493660 HS2ST1Q7LGA3 356 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms