RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 ADH1AP07327 375 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 RPL17P18621 184 aaKnown RBP16.15■□□□□ 0.18
ATG4B-223ENST00000493618 GJB2P29033 226 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 DSG1Q02413 1049 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 PDIA5Q14554 519 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 PPP2R5AQ15172 486 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 KCNK18Q7Z418 384 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 PALB2Q86YC2 1186 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 RIN2Q8WYP3 895 aaPredicted RBP16.15■□□□□ 0.18
ATG4B-223ENST00000493618 ASIC4Q96FT7 647 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 RAB34Q9BZG1 259 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.15■□□□□ 0.18
ATG4B-223ENST00000493618 LIMD1Q9UGP4 676 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 ADAM28Q9UKQ2 775 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 SSX2IPQ9Y2D8 614 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 ZMYM2Q9UBW7 1377 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 CCDC169A6NNP5 214 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 HIP1RO75146 1068 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 BRD1O95696 1058 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 GLUD1P00367 558 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 PDGFBP01127 241 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-223ENST00000493618 PEX3P56589 373 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 TUSC3Q13454 348 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 HSP90AA2PQ14568 343 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-223ENST00000493618 IER5LQ5T953 404 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 KRT79Q5XKE5 535 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 PRSS55Q6UWB4 352 aaPredicted RBP16.14■□□□□ 0.17
ATG4B-223ENST00000493618 DTHD1Q6ZMT9 781 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 BMP8AQ7Z5Y6 402 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 SUGP1Q8IWZ8 645 aaKnown RBP16.14■□□□□ 0.17
ATG4B-223ENST00000493618 KIFAP3Q92845 792 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 PLIN2Q99541 437 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 ADPGKQ9BRR6 497 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 MMTAG2Q9BU76 263 aaKnown RBP16.14■□□□□ 0.17
ATG4B-223ENST00000493618 RUSC1Q9BVN2 902 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 RXFP1Q9HBX9 757 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 CHST7Q9NS84 486 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 DNM3Q9UQ16 869 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 KIF3AQ9Y496 699 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 DOCK6Q96HP0 2047 aa16.14■□□□□ 0.17
ATG4B-223ENST00000493618 CCDC195A0A1B0GUA6 201 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 H3BQV1 296 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 RFPL2O75678 378 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 KIF4AO95239 1232 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 VCPP55072 806 aaKnown RBP16.13■□□□□ 0.17
ATG4B-223ENST00000493618 USP41Q3LFD5 358 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 GLRA4Q5JXX5 417 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 ATF7IP2Q5U623 682 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 DAW1Q8N136 415 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 FBXL6Q8N531 539 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 SORCS3Q9UPU3 1222 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 STK24Q9Y6E0 443 aa16.13■□□□□ 0.17
ATG4B-223ENST00000493618 SFI1A8K8P3 1242 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 K7ERI5 159 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 LAD1O00515 517 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 THP07101 528 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 IGFBP6P24592 240 aaPredicted RBP16.12■□□□□ 0.17
ATG4B-223ENST00000493618 PRPHP41219 470 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 NPTX2P47972 431 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 EFNA5P52803 228 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 NHLH1Q02575 133 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 RAD51AP2Q09MP3 1159 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 MTMR3Q13615 1198 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 NAB2Q15742 525 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 DCAF4L1Q3SXM0 396 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 RTP2Q5QGT7 225 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 CCDC149Q6ZUS6 474 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 ALYREFQ86V81 257 aaKnown RBP16.12■□□□□ 0.17
ATG4B-223ENST00000493618 CEP57Q86XR8 500 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 ZDHHC14Q8IZN3 488 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 PRSS33Q8NF86 280 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 PNMA5Q96PV4 448 aa16.12■□□□□ 0.17
ATG4B-223ENST00000493618 VWA3AA6NCI4 1184 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 TGM5O43548 720 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 OSTNP61366 133 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 ATP2C1P98194 919 aaPredicted RBP16.11■□□□□ 0.17
ATG4B-223ENST00000493618 MAPK7Q13164 816 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 RILPL1Q5EBL4 403 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 FAM171A1Q5VUB5 890 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 RINT1Q6NUQ1 792 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 TAS1R3Q7RTX0 852 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 PLCD3Q8N3E9 789 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 CEP120Q8N960 986 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 UPF2Q9HAU5 1272 aaKnown RBP16.11■□□□□ 0.17
ATG4B-223ENST00000493618 KMT5AQ9NQR1 393 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 SMC3Q9UQE7 1217 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 SF3B1O75533 1304 aaKnown RBP eCLIP16.11■□□□□ 0.17
ATG4B-223ENST00000493618 PHLPP2Q6ZVD8 1323 aa16.11■□□□□ 0.17
ATG4B-223ENST00000493618 DOCK8Q8NF50 2099 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 MUC6Q6W4X9 2439 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 SLC16A4O15374 487 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 DMP1Q13316 513 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-223ENST00000493618 C15orf39Q6ZRI6 1047 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 C1orf186Q6ZWK4 172 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 OTOP3Q7RTS5 596 aa16.1■□□□□ 0.17
ATG4B-223ENST00000493618 CMASQ8NFW8 434 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-223ENST00000493618 SMG7Q92540 1137 aaKnown RBP16.1■□□□□ 0.17
ATG4B-223ENST00000493618 ZNF707Q96C28 371 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-223ENST00000493618 ACSF2Q96CM8 615 aaPredicted RBP16.1■□□□□ 0.17
ATG4B-223ENST00000493618 ACO2Q99798 780 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms