RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 MTFR1LQ9H019 292 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 POLR3FQ9H1D9 316 aaPredicted RBP20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 AFG3L2Q9Y4W6 797 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 GRIN2DO15399 1336 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 H0YCG3 227 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 ATMINO43313 823 aaPredicted RBP20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 SUPT20HL2P0C7V6 817 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 ABCD1P33897 745 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 MARCKSL1P49006 195 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 GCNT1Q02742 428 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 SUPT20HL1Q3ZLR7 823 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 DNAJC21Q5F1R6 531 aaKnown RBP20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 AADACL2Q6P093 401 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 C15orf39Q6ZRI6 1047 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 ADAT2Q7Z6V5 191 aaKnown RBP20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 TRPM4Q8TD43 1214 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 RAB17Q9H0T7 212 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 GTF3C4Q9UKN8 822 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 TRPC6Q9Y210 931 aa20.3■□□□□ 0.84
TSC22D4-205ENST00000493217 MYPNQ86TC9 1320 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 A6NNZ2 444 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 SORBS3O60504 671 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 ATP4AP20648 1035 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 COPB2P35606 906 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 CLDN10P78369 228 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 DR1Q01658 176 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 TUBB8Q3ZCM7 444 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 DHX38Q92620 1227 aaKnown RBP20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 KCNN1Q92952 543 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 ELMO3Q96BJ8 720 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 BICD1Q96G01 975 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 ATP6V1G3Q96LB4 118 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 TRIM51Q9BSJ1 452 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 WNT8AQ9H1J5 351 aa20.29■□□□□ 0.84
TSC22D4-205ENST00000493217 TULP2O00295 520 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 ZC3H11AO75152 810 aaKnown RBP eCLIP20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 ATG7O95352 703 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 MTERF2Q49AM1 385 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 NOL9Q5SY16 702 aaKnown RBP20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 CEP85LQ5SZL2 805 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 DUPD1Q68J44 220 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 ENOSF1Q7L5Y1 443 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 ZNF564Q8TBZ8 553 aaPredicted RBP20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 ATP8B4Q8TF62 1192 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 ZNF516Q92618 1163 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 NUP85Q9BW27 656 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 DPH5Q9H2P9 285 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 KCNG1Q9UIX4 513 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 MAFBQ9Y5Q3 323 aaPredicted RBP20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 MYH9P35579 1960 aaKnown RBP20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 TMEM110-MUSTN1A8MSY1 372 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 EIF3HO15372 352 aaKnown RBP eCLIP20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 HSPA6P17066 643 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 ICAM3P32942 547 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 DHX34Q14147 1143 aaKnown RBP20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 KDM7AQ6ZMT4 941 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 TMC3Q7Z5M5 1100 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 ZNF526Q8TF50 670 aaPredicted RBP20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 GLG1Q92896 1179 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 ERP44Q9BS26 406 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 PI4K2AQ9BTU6 479 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 TMBIM4Q9HC24 238 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 KIAA1586Q9HCI6 787 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 UVRAGQ9P2Y5 699 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 STYXL1Q9Y6J8 313 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 LCTP09848 1927 aa20.28■□□□□ 0.84
TSC22D4-205ENST00000493217 SSC5DA1L4H1 1573 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 ZNFX1Q9P2E3 1918 aaKnown RBP20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 HMGB1P1B2RPK0 211 aaPredicted RBP20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 EXTL3O43909 919 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 GNGT1P63211 74 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 EMC2Q15006 297 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 STXBP2Q15833 593 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 ACAD10Q6JQN1 1059 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 CYFIP1Q7L576 1253 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 DNERQ8NFT8 737 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 ZNF653Q96CK0 615 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 GGA3Q9NZ52 723 aa20.27■□□□□ 0.84
TSC22D4-205ENST00000493217 FAM187AA6NFU0 413 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 CTNNA1P35221 906 aaKnown RBP20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 LIG4P49917 911 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 POLGP54098 1239 aaPredicted RBP20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 MTMR3Q13615 1198 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 SH3D19Q5HYK7 790 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 ZDHHC14Q8IZN3 488 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 PRELID2Q8N945 189 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 PSPC1Q8WXF1 523 aaKnown RBP20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 BTBD6Q96KE9 485 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 PYGMP11217 842 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 CTNNA2P26232 953 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 DRG2P55039 364 aaKnown RBP20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 FSTL1Q12841 308 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 PSMD6Q15008 389 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 SRLQ86TD4 932 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 FAM84AQ96KN4 292 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 FAM81BQ96LP2 452 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 TRIM31Q9BZY9 425 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 PORCNQ9H237 461 aa20.26■□□□□ 0.83
TSC22D4-205ENST00000493217 DHX33Q9H6R0 707 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms