RNA–Protein interactions for RNA: ENST00000493199.1

NEK4-205, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 355 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-205ENST00000493199 VAMP7P51809 220 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 MARSP56192 900 aaKnown RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 UBXN1Q04323 297 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 RNASELQ05823 741 aaKnown RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 FPGSQ05932 587 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 FAAP100Q0VG06 881 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 BFSP1Q12934 665 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 BIRC3Q13489 604 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 KCNJ12Q14500 433 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 SYCP1Q15431 976 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 TRIM60Q495X7 471 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 TCP11X2Q5H9J9 407 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 DCAF17Q5H9S7 520 aaPredicted RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 KRT39Q6A163 491 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 GBP6Q6ZN66 633 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 CACNA2D4Q7Z3S7 1137 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 VPS36Q86VN1 386 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 KSR1Q8IVT5 923 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 THNSL1Q8IYQ7 743 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 TXLNBQ8N3L3 684 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 RDH13Q8NBN7 331 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 RNF214Q8ND24 703 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 TRIM44Q96DX7 344 aaPredicted RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 FAM212AQ96EL1 285 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 DDX27Q96GQ7 796 aaKnown RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 CNOT6LQ96LI5 555 aaKnown RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 UROC1Q96N76 676 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 FAM213AQ9BRX8 229 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 ZBED2Q9BTP6 218 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 STRA6Q9BX79 667 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 PPP1R12CQ9BZL4 782 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 TRPV6Q9H1D0 765 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 KCTD10Q9H3F6 313 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 DOCK5Q9H7D0 1870 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 GRPEL1Q9HAV7 217 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 CBX8Q9HC52 389 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 LUC7LQ9NQ29 371 aaKnown RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 RGS18Q9NS28 235 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 FAM105AQ9NUU6 356 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 FANCLQ9NW38 375 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 UBQLN1Q9UMX0 589 aaKnown RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 COLQQ9Y215 455 aaPredicted RBP5.78□□□□□ -1.48
NEK4-205ENST00000493199 RWDD3Q9Y3V2 267 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 STYXL1Q9Y6J8 313 aa5.78□□□□□ -1.48
NEK4-205ENST00000493199 SCN10AQ9Y5Y9 1956 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 LRRC10BA6NIK2 292 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 TSPAN1O60635 241 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 ZC3H11AO75152 810 aaKnown RBP eCLIP5.77□□□□□ -1.49
NEK4-205ENST00000493199 OFD1O75665 1012 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 IPO7O95373 1038 aaKnown RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 NPTXRO95502 500 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 ALDH2P05091 517 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 THP07101 528 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 DLATP10515 647 aaKnown RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 CYP3A5P20815 502 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 TBXAS1P24557 533 aaPredicted RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 ATICP31939 592 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 GSDMDP57764 484 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 SNX16P57768 344 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 ZNF200P98182 395 aaPredicted RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 ELAVL2Q12926 359 aaKnown RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 MKRN4PQ13434 485 aaPredicted RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 EXOC3L4Q17RC7 722 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 SGSM1Q2NKQ1 1148 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 VWA3BQ502W6 1294 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 PLEKHG4Q58EX7 1191 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 SPOUT1Q5T280 376 aaKnown RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 TTI2Q6NXR4 508 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 RUFY4Q6ZNE9 571 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 ENOSF1Q7L5Y1 443 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 ZBTB33Q86T24 672 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 LUZP1Q86V48 1076 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 NPAS4Q8IUM7 802 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 WDR49Q8IV35 697 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 SMYD4Q8IYR2 804 aaPredicted RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 NEK11Q8NG66 645 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 PHOSPHO2Q8TCD6 241 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 BSNDQ8WZ55 320 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 JAKMIP2Q96AA8 810 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 ZNF560Q96MR9 790 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 PPP1R16BQ96T49 567 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 ADAM2Q99965 735 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 FUCA2Q9BTY2 467 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 CCDC113Q9H0I3 377 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 NDST4Q9H3R1 872 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 SEMA6BQ9H3T3 888 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 PCIF1Q9H4Z3 704 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 POLD4Q9HCU8 107 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 IL23AQ9NPF7 189 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 TMEM161AQ9NX61 479 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 IMPACTQ9P2X3 320 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 LIMA1Q9UHB6 759 aaKnown RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 SSX2IPQ9Y2D8 614 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 NOC2LQ9Y3T9 749 aaKnown RBP5.77□□□□□ -1.49
NEK4-205ENST00000493199 C2CD2Q9Y426 696 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 PCDHB2Q9Y5E7 798 aa5.77□□□□□ -1.49
NEK4-205ENST00000493199 GRIN2DO15399 1336 aa5.76□□□□□ -1.49
NEK4-205ENST00000493199 ZSWIM8A7E2V4 1837 aa5.76□□□□□ -1.49
NEK4-205ENST00000493199 WDR81Q562E7 1941 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms