RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 EPCAMP16422 314 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 LIG1P18858 919 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 GLUD2P49448 558 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 MAPK7Q13164 816 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 TUSC3Q13454 348 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 USP41Q3LFD5 358 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 EEF1DP3Q658K8 133 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 CABP7Q86V35 215 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 HDAC7Q8WUI4 952 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 SPIRE2Q8WWL2 714 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 CDK5RAP3Q96JB5 506 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 FBXL18Q96ME1 805 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 ACO2Q99798 780 aaKnown RBP12.64□□□□□ -0.39
LRTM1-202ENST00000493075 KIFC3Q9BVG8 833 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 APOL5Q9BWW9 433 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 PTPRHQ9HD43 1115 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 KMT5AQ9NQR1 393 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.64□□□□□ -0.39
LRTM1-202ENST00000493075 ARHGAP28Q9P2N2 729 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 DPP7Q9UHL4 492 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 MUTYHQ9UIF7 546 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 ADAM28Q9UKQ2 775 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 USP20Q9Y2K6 914 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 NR2E1Q9Y466 385 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 ARID2Q68CP9 1835 aa12.64□□□□□ -0.39
LRTM1-202ENST00000493075 FAM86C2PA6NEL3 165 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 PTGESO14684 152 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 RECQL4O94761 1208 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 SSBP05455 408 aaKnown RBP eCLIP12.63□□□□□ -0.39
LRTM1-202ENST00000493075 ADH1AP07327 375 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 PLA2G4BP0C869 781 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 SLC12A3P55017 1021 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 HSP90AA2PQ14568 343 aaPredicted RBP12.63□□□□□ -0.39
LRTM1-202ENST00000493075 NAB2Q15742 525 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 TMEM119Q4V9L6 283 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 KIAA1841Q6NSI8 718 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 FUT10Q6P4F1 479 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 ELMSAN1Q6PJG2 1045 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 CYP26C1Q6V0L0 522 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 GPR149Q86SP6 731 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 CMASQ8NFW8 434 aaPredicted RBP12.63□□□□□ -0.39
LRTM1-202ENST00000493075 KCNN1Q92952 543 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 INTS4Q96HW7 963 aaKnown RBP12.63□□□□□ -0.39
LRTM1-202ENST00000493075 MRPL4Q9BYD3 311 aaKnown RBP12.63□□□□□ -0.39
LRTM1-202ENST00000493075 RHOBTB2Q9BYZ6 727 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 GPR62Q9BZJ7 368 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 SFXN1Q9H9B4 322 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 FNIP2Q9P278 1114 aa12.63□□□□□ -0.39
LRTM1-202ENST00000493075 SFI1A8K8P3 1242 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 F8W810 466 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 C2CD2LO14523 706 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 TEX28O15482 410 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 PAPLNO95428 1278 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 BRD1O95696 1058 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 PLS3P13797 630 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 LONP1P36776 959 aaKnown RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 UBA7P41226 1012 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 GRM5P41594 1212 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 SMTNP53814 917 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 ZXDAP98168 799 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 CREMQ03060 361 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 ZRSR1Q15695 479 aaKnown RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 XKR4Q5GH76 650 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 RARS2Q5T160 578 aaKnown RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 C15orf39Q6ZRI6 1047 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 TAS1R3Q7RTX0 852 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 BMP8AQ7Z5Y6 402 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 C12orf76Q8N812 135 aaPredicted RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 CALML4Q96GE6 196 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 POMKQ9H5K3 350 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 USTQ9Y2C2 406 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 HCN4Q9Y3Q4 1203 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 SF3B1O75533 1304 aaKnown RBP eCLIP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 H0YCG3 227 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 MCF2P10911 925 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 SCP2P22307 547 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 PROZP22891 400 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 ELAVL2Q12926 359 aaKnown RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 SF3A1Q15459 793 aaKnown RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 DCLRE1AQ6PJP8 1040 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 ALKAL1Q6UXT8 129 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 TRIM67Q6ZTA4 783 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 ZDHHC14Q8IZN3 488 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 PLCD3Q8N3E9 789 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 TMEM161BQ8NDZ6 487 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 UROC1Q96N76 676 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 PPP1R10Q96QC0 940 aaKnown RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 CCDC94Q9BW85 323 aaPredicted RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 TARS2Q9BW92 718 aaKnown RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 CDT1Q9H211 546 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 PLEKHA4Q9H4M7 779 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 TOPORSQ9NS56 1045 aaPredicted RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 LARSQ9P2J5 1176 aaKnown RBP12.62□□□□□ -0.39
LRTM1-202ENST00000493075 ODF2LQ9ULJ1 636 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
LRTM1-202ENST00000493075 CASTOR2A6NHX0 329 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 TMEM189-UBE2V1I3L0A0 370 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 ABLIM1O14639 778 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 SLC16A4O15374 487 aa12.61□□□□□ -0.39
LRTM1-202ENST00000493075 TOM1L1O75674 476 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms