RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 KLK14Q9P0G3 267 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 LIMD1Q9UGP4 676 aa13.74□□□□□ -0.21
COL6A1-205ENST00000492851 RBM19Q9Y4C8 960 aaKnown RBP13.74□□□□□ -0.21
COL6A1-205ENST00000492851 C5orf42Q9H799 3197 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 CCDC195A0A1B0GUA6 201 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 WEE2P0C1S8 567 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 MCM2P49736 904 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 RILPL1Q5EBL4 403 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 TAS1R1Q7RTX1 841 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 CDR2LQ86X02 465 aaPredicted RBP13.73□□□□□ -0.21
COL6A1-205ENST00000492851 SNX29Q8TEQ0 813 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 NXPE3Q969Y0 559 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 DRC1Q96MC2 740 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 TIPINQ9BVW5 301 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 PDZD7Q9H5P4 517 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 DDX19AQ9NUU7 478 aaKnown RBP13.73□□□□□ -0.21
COL6A1-205ENST00000492851 ZDHHC7Q9NXF8 308 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 IGSF9Q9P2J2 1179 aa13.73□□□□□ -0.21
COL6A1-205ENST00000492851 PAPLNO95428 1278 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 AVPR2P30518 371 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 C8orf34Q49A92 452 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 ATF7IP2Q5U623 682 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 RIN2Q8WYP3 895 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-205ENST00000492851 GPR62Q9BZJ7 368 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 CCDC113Q9H0I3 377 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 TMEM134Q9H6X4 195 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 PIDD1Q9HB75 910 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 WDR6Q9NNW5 1121 aaKnown RBP13.72□□□□□ -0.21
COL6A1-205ENST00000492851 SNTG2Q9NY99 539 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 CDH22Q9UJ99 828 aa13.72□□□□□ -0.21
COL6A1-205ENST00000492851 ARID2Q68CP9 1835 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 TRAPPC3O43617 180 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 RECQL4O94761 1208 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 BRD1O95696 1058 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 LIG1P18858 919 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 TOB1P50616 345 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-205ENST00000492851 YARSP54577 528 aaKnown RBP13.71□□□□□ -0.21
COL6A1-205ENST00000492851 DMP1Q13316 513 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-205ENST00000492851 TDGQ13569 410 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 KANK3Q6NY19 840 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 LILRA6Q6PI73 481 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 RTL10Q7L3V2 364 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 ALYREFQ86V81 257 aaKnown RBP13.71□□□□□ -0.21
COL6A1-205ENST00000492851 PALB2Q86YC2 1186 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 BSNDQ8WZ55 320 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 UROC1Q96N76 676 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 TTPALQ9BTX7 342 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 TOPORSQ9NS56 1045 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-205ENST00000492851 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.71□□□□□ -0.21
COL6A1-205ENST00000492851 TNFSF13BQ9Y275 285 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 PCDHB6Q9Y5E3 794 aa13.71□□□□□ -0.21
COL6A1-205ENST00000492851 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 H3BQV1 296 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 TGM5O43548 720 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 CLCN5P51795 746 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 ECM1Q16610 540 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 FAM171A1Q5VUB5 890 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 MCTP1Q6DN14 999 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 DCLRE1AQ6PJP8 1040 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 SMG7Q92540 1137 aaKnown RBP13.7□□□□□ -0.22
COL6A1-205ENST00000492851 NTPCRQ9BSD7 190 aaKnown RBP13.7□□□□□ -0.22
COL6A1-205ENST00000492851 CCDC94Q9BW85 323 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-205ENST00000492851 MRPL4Q9BYD3 311 aaKnown RBP13.7□□□□□ -0.22
COL6A1-205ENST00000492851 PRKD2Q9BZL6 878 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 MFSD1Q9H3U5 465 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.7□□□□□ -0.22
COL6A1-205ENST00000492851 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 KCND2Q9NZV8 630 aa13.7□□□□□ -0.22
COL6A1-205ENST00000492851 ZFP37Q9Y6Q3 630 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-205ENST00000492851 TMEM189-UBE2V1I3L0A0 370 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 PTGESO14684 152 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 SLC26A4O43511 780 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 HNRNPA1P09651 372 aaKnown RBP eCLIP13.69□□□□□ -0.22
COL6A1-205ENST00000492851 SCP2P22307 547 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 NPTX2P47972 431 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 MRE11P49959 708 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 SMTNP53814 917 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 PEX3P56589 373 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 NBR1Q14596 966 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 IER5LQ5T953 404 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 ARL6IP4Q66PJ3 421 aaKnown RBP13.69□□□□□ -0.22
COL6A1-205ENST00000492851 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 DDX27Q96GQ7 796 aaKnown RBP13.69□□□□□ -0.22
COL6A1-205ENST00000492851 KCNK12Q9HB15 430 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 KMT5AQ9NQR1 393 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 EPS15L1Q9UBC2 864 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 GDAQ9Y2T3 454 aa13.69□□□□□ -0.22
COL6A1-205ENST00000492851 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.69□□□□□ -0.22
COL6A1-205ENST00000492851 CLUHO75153 1309 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 CASTOR2A6NHX0 329 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 TTLL13PA6NNM8 815 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 E9PMD0 336 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 F8W810 466 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 H0YCG3 227 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 ZMYND10O75800 440 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 B3GAT3O94766 335 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 ASGR2P07307 311 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 GUCY2CP25092 1073 aa13.68□□□□□ -0.22
COL6A1-205ENST00000492851 GBP2P32456 591 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms