RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 POTEMA6NI47 508 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 XYLBO75191 536 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 TADA2AO75478 443 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 DGAT1O75907 488 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 CDKL5O76039 1030 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 POU2F2P09086 479 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 GLULP15104 373 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 XBP1P17861 261 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 RPL17P18621 184 aaKnown RBP12.22□□□□□ -0.45
SND1-215ENST00000492772 AKAP5P24588 427 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 PFKPQ01813 784 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 CYP4A11Q02928 519 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 SPIRE1Q08AE8 756 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 CAPSQ13938 189 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 CTTNQ14247 550 aaKnown RBP12.22□□□□□ -0.45
SND1-215ENST00000492772 MLF2Q15773 248 aaPredicted RBP12.22□□□□□ -0.45
SND1-215ENST00000492772 RTP2Q5QGT7 225 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 PPM1LQ5SGD2 360 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 PDXDC1Q6P996 788 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 POTEGQ6S5H5 508 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 RSPO2Q6UXX9 243 aaPredicted RBP12.22□□□□□ -0.45
SND1-215ENST00000492772 GRASPQ7Z6J2 395 aaPredicted RBP12.22□□□□□ -0.45
SND1-215ENST00000492772 SKAP1Q86WV1 359 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 POTEDQ86YR6 584 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 SUMF1Q8NBK3 374 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 GSTCDQ8NEC7 633 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 PIK3R5Q8WYR1 880 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 HAS1Q92839 578 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 FGF14Q92915 247 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 AIFM3Q96NN9 605 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 TTPALQ9BTX7 342 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 DDX23Q9BUQ8 820 aaKnown RBP12.22□□□□□ -0.45
SND1-215ENST00000492772 PHF20Q9BVI0 1012 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 OSBPL6Q9BZF3 934 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 KCNJ14Q9UNX9 436 aa12.22□□□□□ -0.45
SND1-215ENST00000492772 LAMTOR5O43504 91 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 LYPLA2O95372 231 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 BAG4O95429 457 aaKnown RBP12.21□□□□□ -0.45
SND1-215ENST00000492772 NPTXRO95502 500 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 C8AP07357 584 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 SDHBP21912 280 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 GPC5P78333 572 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 ELAVL2Q12926 359 aaKnown RBP12.21□□□□□ -0.45
SND1-215ENST00000492772 TUSC3Q13454 348 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 PSMD5Q16401 504 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 PRSS55Q6UWB4 352 aaPredicted RBP12.21□□□□□ -0.45
SND1-215ENST00000492772 PARM1Q6UWI2 310 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 TPH2Q8IWU9 490 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 MAML2Q8IZL2 1156 aaPredicted RBP12.21□□□□□ -0.45
SND1-215ENST00000492772 GPR161Q8N6U8 529 aaKnown RBP12.21□□□□□ -0.45
SND1-215ENST00000492772 ASAP3Q8TDY4 903 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 FGF13Q92913 245 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 PRIMPOLQ96LW4 560 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 ZSWIM6Q9HCJ5 1215 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 ANKEF1Q9NU02 776 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 SPATA6Q9NWH7 488 aaPredicted RBP12.21□□□□□ -0.45
SND1-215ENST00000492772 NCDNQ9UBB6 729 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 PARP2Q9UGN5 583 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 PCDHGA2Q9Y5H1 932 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 CYP46A1Q9Y6A2 500 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 NCOR2Q9Y618 2525 aa12.21□□□□□ -0.45
SND1-215ENST00000492772 COL4A3Q01955 1670 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 STK36Q9NRP7 1315 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 A0A1B0GUA9 196 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 ZBTB39O15060 712 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 B4GALT5O43286 388 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 LRRN2O75325 713 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 ARL2P36404 184 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 SNW1Q13573 536 aaKnown RBP12.2□□□□□ -0.46
SND1-215ENST00000492772 UBXN2BQ14CS0 331 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 PIK3AP1Q6ZUJ8 805 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 DCLK2Q8N568 766 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 SECISBP2LQ93073 1101 aaKnown RBP12.2□□□□□ -0.46
SND1-215ENST00000492772 CLSTN3Q9BQT9 956 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 RPP25Q9BUL9 199 aaKnown RBP12.2□□□□□ -0.46
SND1-215ENST00000492772 KLK14Q9P0G3 267 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 CACNA1IQ9P0X4 2223 aa12.2□□□□□ -0.46
SND1-215ENST00000492772 VWA8A3KMH1 1905 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 CCL16O15467 120 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 EPB41L2O43491 1005 aaKnown RBP12.19□□□□□ -0.46
SND1-215ENST00000492772 SLITRK3O94933 977 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 KIF4AO95239 1232 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 GLRA2P23416 452 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 NTHL1P78549 312 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 STK3Q13188 491 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 RSPO4Q2I0M5 234 aaPredicted RBP12.19□□□□□ -0.46
SND1-215ENST00000492772 SLC44A4Q53GD3 710 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 VARS2Q5ST30 1063 aaKnown RBP12.19□□□□□ -0.46
SND1-215ENST00000492772 FAM171A1Q5VUB5 890 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 RTL10Q7L3V2 364 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 CDR2LQ86X02 465 aaPredicted RBP12.19□□□□□ -0.46
SND1-215ENST00000492772 ST13P5Q8NFI4 369 aaPredicted RBP12.19□□□□□ -0.46
SND1-215ENST00000492772 LNX1Q8TBB1 728 aaPredicted RBP12.19□□□□□ -0.46
SND1-215ENST00000492772 SLC7A14Q8TBB6 771 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 HASPINQ8TF76 798 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 ATRIPQ8WXE1 791 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 RABGGTAQ92696 567 aa12.19□□□□□ -0.46
SND1-215ENST00000492772 EIF2AK1Q9BQI3 630 aaKnown RBP12.19□□□□□ -0.46
SND1-215ENST00000492772 PAAF1Q9BRP4 392 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms