RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 PRKD2Q9BZL6 878 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 NT5C3AQ9H0P0 336 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 POLR3FQ9H1D9 316 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-212ENST00000492407 SEMA4AQ9H3S1 761 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 NXF3Q9H4D5 531 aaKnown RBP10.1□□□□□ -0.79
HDAC3-212ENST00000492407 BMP2KQ9NSY1 1161 aaPredicted RBP10.1□□□□□ -0.79
HDAC3-212ENST00000492407 HES2Q9Y543 173 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 KMT2EQ8IZD2 1858 aa10.1□□□□□ -0.79
HDAC3-212ENST00000492407 ANHXE9PGG2 379 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 ACKR2O00590 384 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 B4GALT5O43286 388 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 TGM5O43548 720 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 ZMYND10O75800 440 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 NPTXRO95502 500 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 THP07101 528 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 SRFP11831 508 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 LAMP2P13473 410 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 CYP11B2P19099 503 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 ATP2B1P20020 1258 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 NAMPTP43490 491 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 TRAPPC10P48553 1259 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 RBM25P49756 843 aaKnown RBP10.09□□□□□ -0.79
HDAC3-212ENST00000492407 NEK4P51957 841 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 EFNA5P52803 228 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 HSP90AA2PQ14568 343 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-212ENST00000492407 MAPK6Q16659 721 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 UVSSAQ2YD98 709 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 HAUS3Q68CZ6 603 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 CWF19L1Q69YN2 538 aaKnown RBP10.09□□□□□ -0.79
HDAC3-212ENST00000492407 PHLDB3Q6NSJ2 640 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 CCDC105Q8IYK2 499 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 CNPY4Q8N129 248 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 SLC44A3Q8N4M1 653 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 NECAB1Q8N987 351 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 PIGOQ8TEQ8 1089 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 ADPGKQ9BRR6 497 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 TTPALQ9BTX7 342 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 GPR62Q9BZJ7 368 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 FOXP1Q9H334 677 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-212ENST00000492407 SLC2A4RGQ9NR83 387 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 PARP2Q9UGN5 583 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 FBXL21Q9UKT6 434 aa10.09□□□□□ -0.79
HDAC3-212ENST00000492407 PHLPP2Q6ZVD8 1323 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 USP34Q70CQ2 3546 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 LRRIQ4A6NIV6 560 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 TMEM189-UBE2V1I3L0A0 370 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 USO1O60763 962 aaKnown RBP10.08□□□□□ -0.8
HDAC3-212ENST00000492407 N4BP1O75113 896 aaKnown RBP10.08□□□□□ -0.8
HDAC3-212ENST00000492407 AKAP5P24588 427 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 GBP2P32456 591 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-212ENST00000492407 PRPF4BQ13523 1007 aaKnown RBP10.08□□□□□ -0.8
HDAC3-212ENST00000492407 PDIA5Q14554 519 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 DCAF4L1Q3SXM0 396 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 PADI6Q6TGC4 694 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 PALB2Q86YC2 1186 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 RIN2Q8WYP3 895 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-212ENST00000492407 KIFAP3Q92845 792 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 UROC1Q96N76 676 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 APOL6Q9BWW8 343 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 SMOC2Q9H3U7 446 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 PDZD7Q9H5P4 517 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 PIDD1Q9HB75 910 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 FAM86C1Q9NVL1 165 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 KCNG1Q9UIX4 513 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 FBXW11Q9UKB1 542 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 CACNA1HO95180 2353 aa10.08□□□□□ -0.8
HDAC3-212ENST00000492407 ARHGEF35A5YM69 484 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 PRR23AA6NEV1 266 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 POTEMA6NI47 508 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 CLGNO14967 610 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 TRAPPC3O43617 180 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 RRP9O43818 475 aaKnown RBP10.07□□□□□ -0.8
HDAC3-212ENST00000492407 XYLBO75191 536 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 MED24O75448 989 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 RFPL2O75678 378 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 OR52Z1P0C646 297 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 FXR2P51116 673 aaKnown RBP eCLIP10.07□□□□□ -0.8
HDAC3-212ENST00000492407 HMGN5P82970 282 aaKnown RBP10.07□□□□□ -0.8
HDAC3-212ENST00000492407 NAB2Q15742 525 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 DCLRE1AQ6PJP8 1040 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-212ENST00000492407 SIX5Q8N196 739 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 KCTD17Q8N5Z5 321 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 DTWD2Q8NBA8 298 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 FLCNQ8NFG4 579 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 DEPTORQ8TB45 409 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 LNX1Q8TBB1 728 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-212ENST00000492407 NKD2Q969F2 451 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-212ENST00000492407 IFT74Q96LB3 600 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 CLSTN3Q9BQT9 956 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 RAB34Q9BZG1 259 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 CCDC113Q9H0I3 377 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 TMEM60Q9H2L4 133 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 PPP4R2Q9NY27 417 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 LIMCH1Q9UPQ0 1083 aa10.07□□□□□ -0.8
HDAC3-212ENST00000492407 ZFHX2Q9C0A1 2572 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-212ENST00000492407 DENND4AQ7Z401 1863 aa10.06□□□□□ -0.8
HDAC3-212ENST00000492407 F8W810 466 aa10.06□□□□□ -0.8
HDAC3-212ENST00000492407 WNT7AO00755 349 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms