RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ZFP42Q96MM3 310 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 VN1R3Q9BXE9 311 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 NXF3Q9H4D5 531 aaKnown RBP9.66□□□□□ -0.86
NUP50-217ENST00000491860 C17orf75Q9HAS0 396 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 CHST7Q9NS84 486 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 MARCH5Q9NX47 278 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 ZDHHC7Q9NXF8 308 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 IGSF9Q9P2J2 1179 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 ADAM28Q9UKQ2 775 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 DNM3Q9UQ16 869 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.66□□□□□ -0.86
NUP50-217ENST00000491860 SPTBN4Q9H254 2564 aa9.66□□□□□ -0.86
NUP50-217ENST00000491860 PRR23AA6NEV1 266 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 TEX28O15482 410 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 PAPLNO95428 1278 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 SSBP05455 408 aaKnown RBP eCLIP9.65□□□□□ -0.86
NUP50-217ENST00000491860 PRKCBP05771 671 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 SCP2P22307 547 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 MCM2P49736 904 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 ST3GAL1Q11201 340 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 HSP90AA2PQ14568 343 aaPredicted RBP9.65□□□□□ -0.86
NUP50-217ENST00000491860 RILPL1Q5EBL4 403 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 POTEGQ6S5H5 508 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 DTHD1Q6ZMT9 781 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 RTL10Q7L3V2 364 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 MAEAQ7L5Y9 396 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 IGSF22Q8N9C0 903 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 DRC1Q96MC2 740 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 UROC1Q96N76 676 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 RNF39Q9H2S5 420 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 GPRC5CQ9NQ84 441 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 MAN1C1Q9NR34 630 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 RBM19Q9Y4C8 960 aaKnown RBP9.65□□□□□ -0.86
NUP50-217ENST00000491860 HES2Q9Y543 173 aa9.65□□□□□ -0.86
NUP50-217ENST00000491860 ZFP37Q9Y6Q3 630 aaPredicted RBP9.65□□□□□ -0.86
NUP50-217ENST00000491860 VPS13AQ96RL7 3174 aa9.65□□□□□ -0.87
NUP50-217ENST00000491860 K7ERI5 159 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 WNT7AO00755 349 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 C2CD2LO14523 706 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 B4GALT5O43286 388 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 SLC26A4O43511 780 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 TRAPPC3O43617 180 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 B4GALT3O60512 393 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 SEC24BO95487 1268 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 AKAP5P24588 427 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 AFF1P51825 1210 aaKnown RBP9.64□□□□□ -0.87
NUP50-217ENST00000491860 YARSP54577 528 aaKnown RBP9.64□□□□□ -0.87
NUP50-217ENST00000491860 PTGDRQ13258 359 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 DMP1Q13316 513 aaPredicted RBP9.64□□□□□ -0.87
NUP50-217ENST00000491860 ASCL5Q7RTU5 278 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 C12orf76Q8N812 135 aaPredicted RBP9.64□□□□□ -0.87
NUP50-217ENST00000491860 GSTCDQ8NEC7 633 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 SNX29Q8TEQ0 813 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 TTPALQ9BTX7 342 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 CCDC113Q9H0I3 377 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 NT5C3AQ9H0P0 336 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 BHMT2Q9H2M3 363 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 MFSD1Q9H3U5 465 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 PDZD7Q9H5P4 517 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 WDR6Q9NNW5 1121 aaKnown RBP9.64□□□□□ -0.87
NUP50-217ENST00000491860 TOPORSQ9NS56 1045 aaPredicted RBP9.64□□□□□ -0.87
NUP50-217ENST00000491860 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.64□□□□□ -0.87
NUP50-217ENST00000491860 KCND2Q9NZV8 630 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 LIMD1Q9UGP4 676 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 KIAA1024Q9UPX6 916 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 DMDP11532 3685 aa9.64□□□□□ -0.87
NUP50-217ENST00000491860 C2orf16Q68DN1 1984 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 CCDC195A0A1B0GUA6 201 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 H0Y858 1186 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 H0YCG3 227 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 TMEM189-UBE2V1I3L0A0 370 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 DTNBO60941 627 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 SP100P23497 879 aaPredicted RBP9.63□□□□□ -0.87
NUP50-217ENST00000491860 SMTNP53814 917 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 TDGQ13569 410 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 ATF7IP2Q5U623 682 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.63□□□□□ -0.87
NUP50-217ENST00000491860 C4orf32Q8N8J7 132 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 RIN2Q8WYP3 895 aaPredicted RBP9.63□□□□□ -0.87
NUP50-217ENST00000491860 DDX27Q96GQ7 796 aaKnown RBP9.63□□□□□ -0.87
NUP50-217ENST00000491860 CCDC94Q9BW85 323 aaPredicted RBP9.63□□□□□ -0.87
NUP50-217ENST00000491860 MRPL4Q9BYD3 311 aaKnown RBP9.63□□□□□ -0.87
NUP50-217ENST00000491860 PIDD1Q9HB75 910 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 DDX19AQ9NUU7 478 aaKnown RBP9.63□□□□□ -0.87
NUP50-217ENST00000491860 SLC38A7Q9NVC3 462 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 MIOSQ9NXC5 875 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 SNTG2Q9NY99 539 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 EPS15L1Q9UBC2 864 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 TNFSF13BQ9Y275 285 aa9.63□□□□□ -0.87
NUP50-217ENST00000491860 CLUHO75153 1309 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 H3BQV1 296 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 TGM5O43548 720 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 RECQL4O94761 1208 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 BRD1O95696 1058 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 BMP15O95972 392 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 POU2F2P09086 479 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 HNRNPA1P09651 372 aaKnown RBP eCLIP9.62□□□□□ -0.87
NUP50-217ENST00000491860 HOXA9P31269 272 aa9.62□□□□□ -0.87
NUP50-217ENST00000491860 ABCD1P33897 745 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms