RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 PALB2Q86YC2 1186 aa20.28■□□□□ 0.84
SMIM4-205ENST00000491607 PRSS33Q8NF86 280 aa20.28■□□□□ 0.84
SMIM4-205ENST00000491607 HASPINQ8TF76 798 aa20.28■□□□□ 0.84
SMIM4-205ENST00000491607 RIN2Q8WYP3 895 aaPredicted RBP20.28■□□□□ 0.84
SMIM4-205ENST00000491607 KIFAP3Q92845 792 aa20.28■□□□□ 0.84
SMIM4-205ENST00000491607 PAAF1Q9BRP4 392 aa20.28■□□□□ 0.84
SMIM4-205ENST00000491607 CCDC113Q9H0I3 377 aa20.28■□□□□ 0.84
SMIM4-205ENST00000491607 RXFP1Q9HBX9 757 aa20.28■□□□□ 0.84
SMIM4-205ENST00000491607 STK24Q9Y6E0 443 aa20.28■□□□□ 0.84
SMIM4-205ENST00000491607 CCDC195A0A1B0GUA6 201 aa20.27■□□□□ 0.84
SMIM4-205ENST00000491607 RECQL4O94761 1208 aa20.27■□□□□ 0.84
SMIM4-205ENST00000491607 PDGFBP01127 241 aaPredicted RBP20.27■□□□□ 0.84
SMIM4-205ENST00000491607 EDN1P05305 212 aa20.27■□□□□ 0.84
SMIM4-205ENST00000491607 VCPP55072 806 aaKnown RBP20.27■□□□□ 0.84
SMIM4-205ENST00000491607 TUSC3Q13454 348 aa20.27■□□□□ 0.84
SMIM4-205ENST00000491607 PDIA5Q14554 519 aa20.27■□□□□ 0.84
SMIM4-205ENST00000491607 IGSF22Q8N9C0 903 aa20.27■□□□□ 0.84
SMIM4-205ENST00000491607 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.27■□□□□ 0.84
SMIM4-205ENST00000491607 GDAQ9Y2T3 454 aa20.27■□□□□ 0.84
SMIM4-205ENST00000491607 KIF3AQ9Y496 699 aa20.27■□□□□ 0.84
SMIM4-205ENST00000491607 WDFY4Q6ZS81 3184 aa20.27■□□□□ 0.84
SMIM4-205ENST00000491607 SF3B1O75533 1304 aaKnown RBP eCLIP20.27■□□□□ 0.83
SMIM4-205ENST00000491607 PTGESO14684 152 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 ST18O60284 1047 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 RFPL2O75678 378 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 THP07101 528 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 EFNA5P52803 228 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 PTPN5P54829 565 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 RABEP1Q15276 862 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 KRT79Q5XKE5 535 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 EEF1DP3Q658K8 133 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 MCTP1Q6DN14 999 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 CMASQ8NFW8 434 aaPredicted RBP20.26■□□□□ 0.83
SMIM4-205ENST00000491607 PRRX2Q99811 253 aa20.26■□□□□ 0.83
SMIM4-205ENST00000491607 PP2D1A8MPX8 630 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 E9PMD0 336 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 LAD1O00515 517 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 TGM5O43548 720 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 KIF4AO95239 1232 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 RPL17P18621 184 aaKnown RBP20.25■□□□□ 0.83
SMIM4-205ENST00000491607 AVPR2P30518 371 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 MRE11P49959 708 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 CREMQ03060 361 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 DCAF4L1Q3SXM0 396 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 ATF7IP2Q5U623 682 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 PRSS55Q6UWB4 352 aaPredicted RBP20.25■□□□□ 0.83
SMIM4-205ENST00000491607 DTHD1Q6ZMT9 781 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 CEP57Q86XR8 500 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 CXCL16Q9H2A7 254 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 DNM3Q9UQ16 869 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 MUC6Q6W4X9 2439 aa20.25■□□□□ 0.83
SMIM4-205ENST00000491607 CCDC169A6NNP5 214 aa20.24■□□□□ 0.83
SMIM4-205ENST00000491607 K7ERI5 159 aa20.24■□□□□ 0.83
SMIM4-205ENST00000491607 CDC25AP30304 524 aa20.24■□□□□ 0.83
SMIM4-205ENST00000491607 GBP2P32456 591 aaPredicted RBP20.24■□□□□ 0.83
SMIM4-205ENST00000491607 RTP2Q5QGT7 225 aa20.24■□□□□ 0.83
SMIM4-205ENST00000491607 SMG7Q92540 1137 aaKnown RBP20.24■□□□□ 0.83
SMIM4-205ENST00000491607 PIDD1Q9HB75 910 aa20.24■□□□□ 0.83
SMIM4-205ENST00000491607 FNIP2Q9P278 1114 aa20.24■□□□□ 0.83
SMIM4-205ENST00000491607 PLXNA3P51805 1871 aa20.24■□□□□ 0.83
SMIM4-205ENST00000491607 DENND4AQ7Z401 1863 aa20.24■□□□□ 0.83
SMIM4-205ENST00000491607 PEX3P56589 373 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 ZRSR1Q15695 479 aaKnown RBP20.23■□□□□ 0.83
SMIM4-205ENST00000491607 IL17AQ16552 155 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 GLRA4Q5JXX5 417 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 NT5DC1Q5TFE4 455 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 FAM171A1Q5VUB5 890 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 CYP26C1Q6V0L0 522 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 APBB1IPQ7Z5R6 666 aaPredicted RBP20.23■□□□□ 0.83
SMIM4-205ENST00000491607 GPR65Q8IYL9 337 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 HDAC7Q8WUI4 952 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 STAMQ92783 540 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 MFSD1Q9H3U5 465 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 PLEKHA4Q9H4M7 779 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 WDR6Q9NNW5 1121 aaKnown RBP20.23■□□□□ 0.83
SMIM4-205ENST00000491607 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.23■□□□□ 0.83
SMIM4-205ENST00000491607 CLUHO75153 1309 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 ZNF318Q5VUA4 2279 aa20.23■□□□□ 0.83
SMIM4-205ENST00000491607 KMT2EQ8IZD2 1858 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 HIP1RO75146 1068 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 PRPHP41219 470 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 NPTX2P47972 431 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 TCF15Q12870 199 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 DMP1Q13316 513 aaPredicted RBP20.22■□□□□ 0.83
SMIM4-205ENST00000491607 NAB2Q15742 525 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 RILPL1Q5EBL4 403 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 TTPALQ9BTX7 342 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 KCNK12Q9HB15 430 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 PHLPP2Q6ZVD8 1323 aa20.22■□□□□ 0.83
SMIM4-205ENST00000491607 H3BQV1 296 aa20.21■□□□□ 0.83
SMIM4-205ENST00000491607 TDGQ13569 410 aa20.21■□□□□ 0.83
SMIM4-205ENST00000491607 PSMD5Q16401 504 aa20.21■□□□□ 0.83
SMIM4-205ENST00000491607 ZNF707Q96C28 371 aaPredicted RBP20.21■□□□□ 0.83
SMIM4-205ENST00000491607 TMX3Q96JJ7 454 aa20.21■□□□□ 0.83
SMIM4-205ENST00000491607 DRC1Q96MC2 740 aa20.21■□□□□ 0.83
SMIM4-205ENST00000491607 RUSC1Q9BVN2 902 aa20.21■□□□□ 0.83
SMIM4-205ENST00000491607 NT5C3AQ9H0P0 336 aa20.21■□□□□ 0.83
SMIM4-205ENST00000491607 UPF2Q9HAU5 1272 aaKnown RBP20.21■□□□□ 0.83
SMIM4-205ENST00000491607 KMT5AQ9NQR1 393 aa20.21■□□□□ 0.83
SMIM4-205ENST00000491607 ZDHHC7Q9NXF8 308 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms