RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 TBC1D10AQ9BXI6 508 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 KCTD10Q9H3F6 313 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 MARCOQ9UEW3 520 aaPredicted RBP10.47□□□□□ -0.73
ERCC3-208ENST00000491292 CCDC195A0A1B0GUA6 201 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 PTDSS1P48651 473 aaKnown RBP10.47□□□□□ -0.73
ERCC3-208ENST00000491292 KDSRQ06136 332 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 ITPK1Q13572 414 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 RRP1BQ14684 758 aaKnown RBP10.47□□□□□ -0.73
ERCC3-208ENST00000491292 NKX1-1Q15270 411 aaPredicted RBP10.47□□□□□ -0.73
ERCC3-208ENST00000491292 DOK7Q18PE1 504 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 PHLDB3Q6NSJ2 640 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 AGGF1Q8N302 714 aaeCLIP10.47□□□□□ -0.73
ERCC3-208ENST00000491292 C1orf131Q8NDD1 294 aaKnown RBP10.47□□□□□ -0.73
ERCC3-208ENST00000491292 GRK7Q8WTQ7 553 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 CPA5Q8WXQ8 436 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 C12orf65Q9H3J6 166 aaKnown RBP10.47□□□□□ -0.73
ERCC3-208ENST00000491292 EBF2Q9HAK2 575 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 RNPEPL1Q9HAU8 725 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 PIDD1Q9HB75 910 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 MTMR4Q9NYA4 1195 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 C4AP0C0L4 1744 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 C4BP0C0L5 1744 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 MYH7P12883 1935 aa10.47□□□□□ -0.73
ERCC3-208ENST00000491292 TOPAZ1Q8N9V7 1692 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 DDX3YO15523 660 aaKnown RBP10.46□□□□□ -0.73
ERCC3-208ENST00000491292 PAEPP09466 180 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 NUDT17P0C025 328 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 CALB2P22676 271 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 P3H1Q32P28 736 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 TLDC1Q6P9B6 456 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 ZDHHC24Q6UX98 284 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 FBXO41Q8TF61 875 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 C11orf70Q9BRQ4 267 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 GINM1Q9NU53 330 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 PPARGC1AQ9UBK2 798 aaKnown RBP10.46□□□□□ -0.73
ERCC3-208ENST00000491292 SERPINB13Q9UIV8 391 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 ATP9AO75110 1047 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 BMP3P12645 472 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 MARK3P27448 753 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 MRPS35P82673 323 aaKnown RBP10.46□□□□□ -0.73
ERCC3-208ENST00000491292 BNIP1Q12981 228 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 GPS1Q13098 491 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 ZCWPW2Q504Y3 356 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 LVRNQ6Q4G3 990 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 CYP4X1Q8N118 509 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 STK32AQ8WU08 396 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 NAP1L4Q99733 375 aaKnown RBP10.46□□□□□ -0.73
ERCC3-208ENST00000491292 NYXQ9GZU5 481 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 SLC5A4Q9NY91 659 aa10.46□□□□□ -0.73
ERCC3-208ENST00000491292 UBR1Q8IWV7 1749 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 M0R2N6 131 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 PFDN1O60925 122 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 UNC5CO95185 931 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 TTC4O95801 387 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 BFSP1Q12934 665 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 PDIA2Q13087 525 aaKnown RBP10.46□□□□□ -0.74
ERCC3-208ENST00000491292 LAMB3Q13751 1172 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 THOC5Q13769 683 aaKnown RBP10.46□□□□□ -0.74
ERCC3-208ENST00000491292 ARSHQ5FYA8 562 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 FAM182AQ5T1J6 154 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 DCUN1D2Q6PH85 259 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 BRINP3Q76B58 766 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 NLRP9Q7RTR0 991 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 CCDC125Q86Z20 511 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 CKAP2Q8WWK9 683 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 CCDC124Q96CT7 223 aaKnown RBP10.46□□□□□ -0.74
ERCC3-208ENST00000491292 TMEM117Q9H0C3 514 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 ETAA1Q9NY74 926 aa10.46□□□□□ -0.74
ERCC3-208ENST00000491292 CORO1CQ9ULV4 474 aaPredicted RBP10.46□□□□□ -0.74
ERCC3-208ENST00000491292 MYO5AQ9Y4I1 1855 aaKnown RBP10.45□□□□□ -0.74
ERCC3-208ENST00000491292 CES2O00748 559 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 SMNDC1O75940 238 aaKnown RBP eCLIP10.45□□□□□ -0.74
ERCC3-208ENST00000491292 TMEM132AQ24JP5 1023 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.45□□□□□ -0.74
ERCC3-208ENST00000491292 FAM102BQ5T8I3 360 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 SNX30Q5VWJ9 437 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 SLC25A41Q8N5S1 370 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 FAM13CQ8NE31 585 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 CFAP57Q96MR6 1250 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 SERPINB12Q96P63 405 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 MKNK1Q9BUB5 465 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 WNT8AQ9H1J5 351 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 DNAJC18Q9H819 358 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 ZDHHC18Q9NUE0 388 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 SLC4A7Q9Y6M7 1214 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 LMO7Q8WWI1 1683 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 ENO1P06733 434 aaKnown RBP10.45□□□□□ -0.74
ERCC3-208ENST00000491292 RALAP11233 206 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 MAGEA4P43358 317 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 NSFP46459 744 aaKnown RBP10.45□□□□□ -0.74
ERCC3-208ENST00000491292 EPHB1P54762 984 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 BLMHQ13867 455 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 LLGL2Q6P1M3 1020 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 INTS5Q6P9B9 1019 aaKnown RBP10.45□□□□□ -0.74
ERCC3-208ENST00000491292 EIF1ADQ8N9N8 165 aaKnown RBP10.45□□□□□ -0.74
ERCC3-208ENST00000491292 UCMAQ8WVF2 138 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 DHX38Q92620 1227 aaKnown RBP10.45□□□□□ -0.74
ERCC3-208ENST00000491292 L3MBTL3Q96JM7 780 aaPredicted RBP10.45□□□□□ -0.74
ERCC3-208ENST00000491292 PI4K2AQ9BTU6 479 aa10.45□□□□□ -0.74
ERCC3-208ENST00000491292 ROPN1BQ9BZX4 212 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms