RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 PTK2Q05397 1052 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 KLHL30Q0D2K2 578 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 BIRC3Q13489 604 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 EXOC8Q8IYI6 725 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 C7orf31Q8N865 590 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 ZNF296Q8WUU4 475 aaPredicted RBP15.09■□□□□ 0.01
SMPD4-219ENST00000491128 TMEM40Q8WWA1 233 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 GPR88Q9GZN0 384 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 KCNG1Q9UIX4 513 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 PPME1Q9Y570 386 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 ZNF236Q9UL36 1845 aa15.09■□□□□ 0.01
SMPD4-219ENST00000491128 FOXN3O00409 490 aaPredicted RBP15.08■□□□□ 0
SMPD4-219ENST00000491128 FAM189A1O60320 539 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 RARBP10826 455 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 ARF4P18085 180 aaPredicted RBP15.08■□□□□ 0
SMPD4-219ENST00000491128 PHKA2P46019 1235 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 KCNJ6P48051 423 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 ASIC2Q16515 512 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 AMHR2Q16671 573 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 EPC2Q52LR7 807 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 KRT39Q6A163 491 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 SLFN12LQ6IEE8 588 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 IRF2BP2Q7Z5L9 587 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 RAET1EQ8TD07 263 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 DHX38Q92620 1227 aaKnown RBP15.08■□□□□ 0
SMPD4-219ENST00000491128 ARID3AQ99856 593 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 C2orf40Q9H1Z8 148 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 CXCL16Q9H2A7 254 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 XPNPEP3Q9NQH7 507 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 APEX2Q9UBZ4 518 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 SRRDQ9UH36 339 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 NRCAMQ92823 1304 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 GTPBP10A4D1E9 387 aaKnown RBP15.08■□□□□ 0
SMPD4-219ENST00000491128 GNG11P61952 73 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 NBPF20Q3BBV1 942 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 TDRD10Q5VZ19 366 aaKnown RBP15.08■□□□□ 0
SMPD4-219ENST00000491128 ZNF571Q7Z3V5 609 aaPredicted RBP15.08■□□□□ 0
SMPD4-219ENST00000491128 TMEM174Q8WUU8 243 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 PAXBP1Q9Y5B6 917 aa15.08■□□□□ 0
SMPD4-219ENST00000491128 SEPT4O43236 478 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 CXCL8P10145 99 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 HNRNPH3P31942 346 aaKnown RBP15.07■□□□□ 0
SMPD4-219ENST00000491128 ZPBP2Q6X784 338 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.07■□□□□ 0
SMPD4-219ENST00000491128 CDT1Q9H211 546 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 HES2Q9Y543 173 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 A0A087X0T9 212 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 F8VZ95 297 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 HAS3O00219 553 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 ASAP2O43150 1006 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 ASGR1P07306 291 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 FAM228BP0C875 321 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 ARHGAP25P42331 645 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 KCNA10Q16322 511 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 SLC9C1Q4G0N8 1177 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 ARHGAP29Q52LW3 1261 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 TSHZ1Q6ZSZ6 1077 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 WNT8BQ93098 351 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 VTI1AQ96AJ9 217 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 MTMR12Q9C0I1 747 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 TMEM8AQ9HCN3 771 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 PTPRHQ9HD43 1115 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 RAB20Q9NX57 234 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 CNTNAP2Q9UHC6 1331 aa15.07■□□□□ 0
SMPD4-219ENST00000491128 COL1A2P08123 1366 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 LAMA2P24043 3122 aaKnown RBP15.06■□□□□ 0
SMPD4-219ENST00000491128 MACROD2A1Z1Q3 448 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 EVI5O60447 810 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 GPR32O75388 356 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 CST3P01034 146 aaPredicted RBP15.06■□□□□ 0
SMPD4-219ENST00000491128 CTSHP09668 335 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 JAM2P57087 298 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 CETN1Q12798 172 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 PSMD6Q15008 389 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 MPZL3Q6UWV2 235 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 KIAA1328Q86T90 577 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 FBXL13Q8NEE6 735 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 TSC1Q92574 1164 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 PACSIN1Q9BY11 444 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 ADAMTS10Q9H324 1103 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 KCND1Q9NSA2 647 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 C17orf102A2RUQ5 167 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 RRN3P2A6NIE6 340 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 TMCO5BA8MYB1 307 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 MAPK13O15264 365 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 MEFVO15553 781 aaPredicted RBP15.06■□□□□ 0
SMPD4-219ENST00000491128 TSPAN1O60635 241 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 ERLIN2O94905 339 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 VNN1O95497 513 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 IBSPP21815 317 aaPredicted RBP15.06■□□□□ 0
SMPD4-219ENST00000491128 CYLC1P35663 651 aaPredicted RBP15.06■□□□□ 0
SMPD4-219ENST00000491128 GJA9P57773 515 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 TFAMQ00059 246 aaKnown RBP15.06■□□□□ 0
SMPD4-219ENST00000491128 MCL1Q07820 350 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 TMC2Q8TDI7 906 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 KREMEN1Q96MU8 473 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 PDZD7Q9H5P4 517 aa15.06■□□□□ 0
SMPD4-219ENST00000491128 OGTO15294 1046 aa15.05■□□□□ 0
SMPD4-219ENST00000491128 ZEB2O60315 1214 aa15.05■□□□□ 0
SMPD4-219ENST00000491128 SERPING1P05155 500 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms