RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 SLC24A5Q71RS6 500 aa20.28■□□□□ 0.84
MCF2L-230ENST00000491028 FRMD5Q7Z6J6 570 aa20.28■□□□□ 0.84
MCF2L-230ENST00000491028 CEP120Q8N960 986 aa20.28■□□□□ 0.84
MCF2L-230ENST00000491028 LINC01599Q8WXQ3 324 aa20.28■□□□□ 0.84
MCF2L-230ENST00000491028 EEF2KMTQ96G04 330 aa20.28■□□□□ 0.84
MCF2L-230ENST00000491028 CNOT6LQ96LI5 555 aaKnown RBP20.28■□□□□ 0.84
MCF2L-230ENST00000491028 RBSNQ9H1K0 784 aa20.28■□□□□ 0.84
MCF2L-230ENST00000491028 IPPQ9Y573 584 aa20.28■□□□□ 0.84
MCF2L-230ENST00000491028 PCDHB2Q9Y5E7 798 aa20.28■□□□□ 0.84
MCF2L-230ENST00000491028 NR2E3Q9Y5X4 410 aa20.28■□□□□ 0.84
MCF2L-230ENST00000491028 C9IYK1 514 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 EFCAB14O75071 495 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 STAG3L1P0CL83 205 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 ZNF18P17022 549 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 EEF1GP26641 437 aaKnown RBP20.27■□□□□ 0.84
MCF2L-230ENST00000491028 ACOT2P49753 483 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 IKBKEQ14164 716 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 INTS8Q75QN2 995 aaKnown RBP20.27■□□□□ 0.84
MCF2L-230ENST00000491028 MRPL10Q7Z7H8 261 aaKnown RBP20.27■□□□□ 0.84
MCF2L-230ENST00000491028 IRF2BP1Q8IU81 584 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 CBWD2Q8IUF1 395 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 BRSK2Q8IWQ3 736 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 SMG8Q8ND04 991 aaKnown RBP20.27■□□□□ 0.84
MCF2L-230ENST00000491028 ZSWIM2Q8NEG5 633 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 BADQ92934 168 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 VWCEQ96DN2 955 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 HSD3B7Q9H2F3 369 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 NXF3Q9H4D5 531 aaKnown RBP20.27■□□□□ 0.84
MCF2L-230ENST00000491028 RNF216Q9NWF9 866 aaPredicted RBP20.27■□□□□ 0.84
MCF2L-230ENST00000491028 RBAKQ9NYW8 714 aaPredicted RBP20.27■□□□□ 0.84
MCF2L-230ENST00000491028 CITO14578 2027 aa20.27■□□□□ 0.84
MCF2L-230ENST00000491028 ABHD14A-ACY1A0A1B0GW23 586 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 KCNJ18B7U540 433 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 ACTN1P12814 892 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 KRT13P13646 458 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 TNFSF9P41273 254 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 KCNJ12Q14500 433 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 SURF1Q15526 300 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 TCTN1Q2MV58 587 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 ZBTB41Q5SVQ8 909 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 USP37Q86T82 979 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 RTN4RL1Q86UN2 441 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-230ENST00000491028 ECHDC2Q86YB7 292 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 RDH13Q8NBN7 331 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 ANKRD20A12PQ8NF67 263 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 PGBD4Q96DM1 585 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 MFSD14AQ96MC6 490 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 ACAP3Q96P50 834 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 RPF1Q9H9Y2 349 aaKnown RBP20.26■□□□□ 0.83
MCF2L-230ENST00000491028 TOPORSQ9NS56 1045 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-230ENST00000491028 ARMCX3Q9UH62 379 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-230ENST00000491028 ZMYND8Q9ULU4 1186 aaPredicted RBP20.26■□□□□ 0.83
MCF2L-230ENST00000491028 ANK1P16157 1881 aa20.26■□□□□ 0.83
MCF2L-230ENST00000491028 BAIAP3O94812 1187 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 IL18RAPO95256 599 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 ADRB2P07550 413 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 ITGA4P13612 1032 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 SYN1P17600 705 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 YARSP54577 528 aaKnown RBP20.25■□□□□ 0.83
MCF2L-230ENST00000491028 MCCD1P59942 119 aaPredicted RBP20.25■□□□□ 0.83
MCF2L-230ENST00000491028 OSTNP61366 133 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 FAM189BP81408 668 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 PPP2R3AQ06190 1150 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 CYP24A1Q07973 514 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 BFSP1Q12934 665 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 PSMD6Q15008 389 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 SEZ6Q53EL9 994 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 TCP11X2Q5H9J9 407 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 BORCS6Q96GS4 357 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 ELAC1Q9H777 363 aaKnown RBP20.25■□□□□ 0.83
MCF2L-230ENST00000491028 UBN1Q9NPG3 1134 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 SNTG2Q9NY99 539 aa20.25■□□□□ 0.83
MCF2L-230ENST00000491028 MKI67P46013 3256 aaKnown RBP20.25■□□□□ 0.83
MCF2L-230ENST00000491028 ENPP3O14638 875 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 EOMESO95936 686 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 CDK11BP21127 795 aaKnown RBP20.24■□□□□ 0.83
MCF2L-230ENST00000491028 ENOX2Q16206 610 aaKnown RBP20.24■□□□□ 0.83
MCF2L-230ENST00000491028 PSRC1Q6PGN9 363 aaPredicted RBP20.24■□□□□ 0.83
MCF2L-230ENST00000491028 ZNF598Q86UK7 904 aaKnown RBP20.24■□□□□ 0.83
MCF2L-230ENST00000491028 TRIM59Q8IWR1 403 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 CD302Q8IX05 232 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 TMEM192Q8IY95 271 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 TMC2Q8TDI7 906 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 LBHD1Q9BQE6 289 aaPredicted RBP20.24■□□□□ 0.83
MCF2L-230ENST00000491028 ASB7Q9H672 318 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 PLEKHA5Q9HAU0 1116 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 TMEM161AQ9NX61 479 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 GIT1Q9Y2X7 761 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 HES2Q9Y543 173 aa20.24■□□□□ 0.83
MCF2L-230ENST00000491028 PDCD11Q14690 1871 aaKnown RBP20.24■□□□□ 0.83
MCF2L-230ENST00000491028 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-230ENST00000491028 RECQL4O94761 1208 aa20.23■□□□□ 0.83
MCF2L-230ENST00000491028 CXCL8P10145 99 aa20.23■□□□□ 0.83
MCF2L-230ENST00000491028 ATF7P17544 494 aaPredicted RBP20.23■□□□□ 0.83
MCF2L-230ENST00000491028 MTIF2P46199 727 aaKnown RBP20.23■□□□□ 0.83
MCF2L-230ENST00000491028 VAMP7P51809 220 aa20.23■□□□□ 0.83
MCF2L-230ENST00000491028 UVSSAQ2YD98 709 aa20.23■□□□□ 0.83
MCF2L-230ENST00000491028 HSP90AA4PQ58FG1 418 aa20.23■□□□□ 0.83
MCF2L-230ENST00000491028 SNX27Q96L92 541 aa20.23■□□□□ 0.83
MCF2L-230ENST00000491028 APOL6Q9BWW8 343 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms