RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 RRP15Q9Y3B9 282 aaKnown RBP3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 RIPOR2Q9Y4F9 1068 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 BACE2Q9Y5Z0 518 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 UTYO14607 1347 aa3.9□□□□□ -1.79
CRNKL1-203ENST00000490258 MYH4Q9Y623 1939 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 ZSWIM8A7E2V4 1837 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 A0A1B0GUL7 405 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 SSU72P8A0A1W2PR75 194 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 BECN2A8MW95 431 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 H3BQF6 201 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 GRM8O00222 908 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 ARHGAP6O43182 974 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 KINO60870 393 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 TAF5LO75529 589 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 SURF6O75683 361 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 ALDH1L1O75891 902 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 YEATS4O95619 227 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 PLA2G1BP04054 148 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 CYBBP04839 570 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 TUBBP07437 444 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 GYS1P13807 737 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 ATP2B1P20020 1258 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 RFX5P48382 616 aaPredicted RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 SLURP1P55000 103 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 EIF5P55010 431 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 EVCP57679 992 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 ST5P78524 1137 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 FOXO4P98177 505 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 POU4F1Q01851 419 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 TBX2Q13207 712 aaPredicted RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 TUBB2AQ13885 445 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 GCKRQ14397 625 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 INF2Q27J81 1249 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 VWA3BQ502W6 1294 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 NOL9Q5SY16 702 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 CWF19L1Q69YN2 538 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 BLOC1S2Q6QNY1 142 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 LMBR1LQ6UX01 489 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 KRBA2Q6ZNG9 492 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 CCDC129Q6ZRS4 1044 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 TMC6Q7Z403 805 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 VSTM4Q8IW00 320 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 ELOA2Q8IYF1 753 aaPredicted RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 CELF2-AS1Q8N7Q2 184 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 SLC43A3Q8NBI5 491 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 CCDC191Q8NCU4 936 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 MNS1Q8NEH6 495 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 PLBD2Q8NHP8 589 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 PLEKHO2Q8TD55 490 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 MRPS27Q92552 414 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 CELF1Q92879 486 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 CHMP4CQ96CF2 233 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 PWWP2AQ96N64 755 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 ZNF396Q96N95 335 aaPredicted RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 MYCBPQ99417 103 aaPredicted RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 ISCA1Q9BUE6 129 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 TUBB2BQ9BVA1 445 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 UTP14AQ9BVJ6 771 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 MXD3Q9BW11 206 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 GBP3Q9H0R5 595 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 NKX2-4Q9H2Z4 354 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 METTL14Q9HCE5 456 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 TRMT1Q9NXH9 659 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 LCMT1Q9UIC8 334 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 TMEFF2Q9UIK5 374 aaPredicted RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 TUBE1Q9UJT0 475 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 FBXL7Q9UJT9 491 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 SCAF8Q9UPN6 1271 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 MRFAP1Q9Y605 127 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 POLR2AP24928 1970 aaKnown RBP3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 PAPPA2Q9BXP8 1791 aa3.89□□□□□ -1.79
CRNKL1-203ENST00000490258 C10orf71Q711Q0 1435 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 C7orf72A4D263 438 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 C2orf71A6NGG8 1288 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 NUDT19A8MXV4 375 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 SMIM22K7EJ46 135 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ZSCAN12O43309 604 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 JAK2O60674 1132 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 SEC31AO94979 1220 aaKnown RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 SMC2O95347 1197 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 CTDNEP1O95476 244 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 MPOP05164 745 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 THBDP07204 575 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ATF2P15336 505 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 TACR1P25103 407 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 L1CAMP32004 1257 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 IL6STP40189 918 aaPredicted RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 AARSP49588 968 aaKnown RBP eCLIP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 GSCP56915 257 aaPredicted RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 CAP1Q01518 475 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 TFCP2Q12800 502 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 OS9Q13438 667 aaPredicted RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 LONRF2Q1L5Z9 754 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 DPY19L1Q2PZI1 675 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 DPCR1Q3MIW9 517 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 BEND6Q5SZJ8 279 aaPredicted RBP3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 GORABQ5T7V8 394 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 CCDC181Q5TID7 509 aa3.88□□□□□ -1.79
CRNKL1-203ENST00000490258 ADALQ6DHV7 355 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms