RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 SLC22A3O75751 556 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 TXNP10599 105 aaKnown RBP3.47□□□□□ -1.85
UBXN4-208ENST00000490163 BMP4P12644 408 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 ALAS2P22557 587 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 SLC16A1P53985 500 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 CLNS1AP54105 237 aaKnown RBP3.47□□□□□ -1.85
UBXN4-208ENST00000490163 YBX1P67809 324 aaKnown RBP3.47□□□□□ -1.85
UBXN4-208ENST00000490163 GOLGA3Q08378 1498 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 ADGRE1Q14246 886 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 TOR2AQ5JU69 321 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 TMC6Q7Z403 805 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 CILP2Q8IUL8 1156 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 NETO2Q8NC67 525 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 SEZ6LQ9BYH1 1024 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 STK32BQ9NY57 414 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 RTEL1Q9NZ71 1219 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 ZDHHC8Q9ULC8 765 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 HDAC5Q9UQL6 1122 aa3.47□□□□□ -1.85
UBXN4-208ENST00000490163 ARHGEF11O15085 1522 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 CCDC151A5D8V7 595 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 FAM171A2A8MVW0 826 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 IPO5O00410 1097 aaKnown RBP3.46□□□□□ -1.85
UBXN4-208ENST00000490163 MTSS1O43312 755 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 CBFA2T3O75081 653 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 SKAP2O75563 359 aaPredicted RBP3.46□□□□□ -1.85
UBXN4-208ENST00000490163 SIX3O95343 332 aaPredicted RBP3.46□□□□□ -1.85
UBXN4-208ENST00000490163 NPPBP16860 134 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 COPAP53621 1224 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 IRF9Q00978 393 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 DCTN1Q14203 1278 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 KIAA0753Q2KHM9 967 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 FKBP15Q5T1M5 1219 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 FAM205BPQ63HN1 556 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 KANK2Q63ZY3 851 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 C8orf86Q6ZUL3 223 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 USP51Q70EK9 711 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 GLRX5Q86SX6 157 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 SLC51AQ86UW1 340 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 LURAP1LQ8IV03 231 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 SYTL1Q8IYJ3 562 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 PDILTQ8N807 584 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 AGBL5Q8NDL9 886 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 ACRBPQ8NEB7 543 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 ARSGQ96EG1 525 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 CHFRQ96EP1 664 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 FCRL2Q96LA5 508 aaPredicted RBP3.46□□□□□ -1.85
UBXN4-208ENST00000490163 GPATCH1Q9BRR8 931 aaKnown RBP3.46□□□□□ -1.85
UBXN4-208ENST00000490163 EDEM3Q9BZQ6 932 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 SERHLQ9NQF3 203 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 FAM50BQ9Y247 325 aa3.46□□□□□ -1.85
UBXN4-208ENST00000490163 KDM5BQ9UGL1 1544 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 PMS2P1A4D2B8 440 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 RRN3P2A6NIE6 340 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 H0Y858 1186 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 CCP110O43303 1012 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 DTNBO60941 627 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 RPL11P62913 178 aaKnown RBP3.46□□□□□ -1.86
UBXN4-208ENST00000490163 SPIRE1Q08AE8 756 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 ZNF174Q15697 407 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 RAB30Q15771 203 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 PKN2Q16513 984 aaKnown RBP3.46□□□□□ -1.86
UBXN4-208ENST00000490163 FOXR1Q6PIV2 292 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 C4orf50Q6ZRC1 276 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 TAS1R1Q7RTX1 841 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 GLIS1Q8NBF1 620 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 APPL2Q8NEU8 664 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 OR14C36Q8NHC7 312 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 CYFIP2Q96F07 1278 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 RBM15Q96T37 977 aaKnown RBP eCLIP3.46□□□□□ -1.86
UBXN4-208ENST00000490163 CARD10Q9BWT7 1032 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 CLEC1BQ9P126 229 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 MARCH4Q9P2E8 410 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-208ENST00000490163 MORF4L1Q9UBU8 362 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 ATP23Q9Y6H3 246 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 CROCC2H7BZ55 1655 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 SAC3D1A6NKF1 404 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 A6NLC8 198 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 A8MXE2 369 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 UBE2CO00762 179 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 PRKCBP05771 671 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 IFNGR1P15260 489 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 CACNB2Q08289 660 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-208ENST00000490163 PDE3AQ14432 1141 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 GLIPR1L2Q4G1C9 344 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 L1TD1Q5T7N2 865 aaKnown RBP3.46□□□□□ -1.86
UBXN4-208ENST00000490163 LCE2CQ5TA81 110 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 TMTC3Q6ZXV5 915 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 ADAT2Q7Z6V5 191 aaKnown RBP3.46□□□□□ -1.86
UBXN4-208ENST00000490163 FAM83CQ9BQN1 747 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 MRPL46Q9H2W6 279 aaKnown RBP3.46□□□□□ -1.86
UBXN4-208ENST00000490163 ORC3Q9UBD5 711 aaPredicted RBP3.46□□□□□ -1.86
UBXN4-208ENST00000490163 RABGAP1Q9Y3P9 1069 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 CSADQ9Y600 493 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 KIAA0586Q9BVV6 1533 aa3.46□□□□□ -1.86
UBXN4-208ENST00000490163 UHRF1BP1LA0JNW5 1464 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 ARAP1Q96P48 1450 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 PPRC1Q5VV67 1664 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 MYL4P12829 197 aa3.45□□□□□ -1.86
UBXN4-208ENST00000490163 CALRP27797 417 aaKnown RBP3.45□□□□□ -1.86
UBXN4-208ENST00000490163 TUSC3Q13454 348 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms