RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 MAN1C1Q9NR34 630 aa21.43■■□□□ 1.02
TNFRSF1B-202ENST00000489921 DDX19AQ9NUU7 478 aaKnown RBP21.43■■□□□ 1.02
TNFRSF1B-202ENST00000489921 VWA8A3KMH1 1905 aa21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 NR1I2O75469 434 aa21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 ADH1AP07327 375 aa21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 CDC25AP30304 524 aa21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 TUSC3Q13454 348 aa21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 LILRA6Q6PI73 481 aa21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 GPR65Q8IYL9 337 aa21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 DAW1Q8N136 415 aa21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 TDRD5Q8NAT2 981 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.42■■□□□ 1.02
TNFRSF1B-202ENST00000489921 E9PMD0 336 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 N4BP1O75113 896 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 RFPL2O75678 378 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 RECQL4O94761 1208 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 CENPBP07199 599 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 SPATA31D3P0C874 917 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 MYBP10242 640 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 IGFBP6P24592 240 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 MTMR3Q13615 1198 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 HSP90AA2PQ14568 343 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 RABEP1Q15276 862 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 USP41Q3LFD5 358 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 SPATA31D4Q6ZUB0 917 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 KCNK18Q7Z418 384 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 ZBTB33Q86T24 672 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 ALYREFQ86V81 257 aaKnown RBP21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 UBALD2Q8IYN6 164 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 PLCD3Q8N3E9 789 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 DEPTORQ8TB45 409 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 SNX29Q8TEQ0 813 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 KIFAP3Q92845 792 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 ZNF707Q96C28 371 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 RHOBTB2Q9BYZ6 727 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 FNIP2Q9P278 1114 aa21.41■■□□□ 1.02
TNFRSF1B-202ENST00000489921 CCDC195A0A1B0GUA6 201 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 CASTOR2A6NHX0 329 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 GLUD1P00367 558 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 C1RP00736 705 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 RPL17P18621 184 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 LIG1P18858 919 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 PRPHP41219 470 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 TCF15Q12870 199 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 PPP2R5AQ15172 486 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 RTP2Q5QGT7 225 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 PALB2Q86YC2 1186 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 SUGP1Q8IWZ8 645 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 DOCK8Q8NF50 2099 aa21.4■■□□□ 1.02
TNFRSF1B-202ENST00000489921 DOCK6Q96HP0 2047 aa21.39■■□□□ 1.02
TNFRSF1B-202ENST00000489921 VPS13AQ96RL7 3174 aa21.39■■□□□ 1.02
TNFRSF1B-202ENST00000489921 LAD1O00515 517 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TGM5O43548 720 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TADA2AO75478 443 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 KIF4AO95239 1232 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 THP07101 528 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 AVPR2P30518 371 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 EFNA5P52803 228 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 MAPK7Q13164 816 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PRSS55Q6UWB4 352 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CCDC149Q6ZUS6 474 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TAS1R3Q7RTX0 852 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 HASPINQ8TF76 798 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 HDAC7Q8WUI4 952 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 RIN2Q8WYP3 895 aaPredicted RBP21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TMX3Q96JJ7 454 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 IFT74Q96LB3 600 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PHOX2BQ99453 314 aa21.39■■□□□ 1.01
TNFRSF1B-202ENST00000489921 NPTX2P47972 431 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ATF7IP2Q5U623 682 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 RINT1Q6NUQ1 792 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CD300LGQ6UXG3 332 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 C1orf186Q6ZWK4 172 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 OTOP3Q7RTS5 596 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 GLYCTKQ8IVS8 523 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 RUSC1Q9BVN2 902 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PTPRHQ9HD43 1115 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 WDR6Q9NNW5 1121 aaKnown RBP21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 GDAQ9Y2T3 454 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 STK24Q9Y6E0 443 aa21.38■■□□□ 1.01
TNFRSF1B-202ENST00000489921 SPDYE4A6NLX3 237 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 K7ERI5 159 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 HIP1RO75146 1068 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CYP26C1Q6V0L0 522 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 DTHD1Q6ZMT9 781 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 LNX1Q8TBB1 728 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ACSF2Q96CM8 615 aaPredicted RBP21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PPP1R10Q96QC0 940 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 CLSTN3Q9BQT9 956 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ADPGKQ9BRR6 497 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 NT5C3AQ9H0P0 336 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PLEKHA4Q9H4M7 779 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ARHGAP28Q9P2N2 729 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 DNM3Q9UQ16 869 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 TNFSF13BQ9Y275 285 aa21.37■■□□□ 1.01
TNFRSF1B-202ENST00000489921 SF3B1O75533 1304 aaKnown RBP eCLIP21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 MRE11P49959 708 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 PEX3P56589 373 aa21.36■■□□□ 1.01
TNFRSF1B-202ENST00000489921 ATP2C1P98194 919 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms