RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 RAB39AQ14964 217 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 FAM47AQ5JRC9 791 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 METTL24Q5JXM2 366 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 ATAT1Q5SQI0 421 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 DOK3Q7L591 496 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 ZNF572Q7Z3I7 529 aaPredicted RBP7.31□□□□□ -1.24
VPS26A-206ENST00000489794 DRC7Q8IY82 874 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 TRMT2AQ8IZ69 625 aaKnown RBP7.31□□□□□ -1.24
VPS26A-206ENST00000489794 FUKQ8N0W3 1084 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 MAGEB6Q8N7X4 407 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 DNERQ8NFT8 737 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 OR2I1PQ8NGU4 316 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 CLIP3Q96DZ5 547 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 FAM89AQ96GI7 184 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 CCDC136Q96JN2 1154 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 ZNF512Q96ME7 567 aaPredicted RBP7.31□□□□□ -1.24
VPS26A-206ENST00000489794 POLHQ9Y253 713 aa7.31□□□□□ -1.24
VPS26A-206ENST00000489794 ERC2O15083 957 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 CYP27B1O15528 508 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 PJA2O43164 708 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 GPR32O75388 356 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 ARIH2O95376 493 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 COMTP21964 271 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 IL12RB1P42701 662 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 SLC6A9P48067 706 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 PGS1Q32NB8 556 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 HSP90AB2PQ58FF8 381 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 PRAMEF14Q5SWL7 426 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 LIMS2Q7Z4I7 341 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 RSPH3Q86UC2 560 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 FAM83AQ86UY5 434 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 TPH2Q8IWU9 490 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 D2HGDHQ8N465 521 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 HPS3Q969F9 1004 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 C1GALT1C1Q96EU7 318 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 KMT5AQ9NQR1 393 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 CALCOCO1Q9P1Z2 691 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 HDAC5Q9UQL6 1122 aa7.3□□□□□ -1.24
VPS26A-206ENST00000489794 K7ESM1 405 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 FOXS1O43638 330 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 SNRPA1P09661 255 aaKnown RBP7.29□□□□□ -1.24
VPS26A-206ENST00000489794 LPOP22079 712 aaPredicted RBP7.29□□□□□ -1.24
VPS26A-206ENST00000489794 MSX2P35548 267 aaPredicted RBP7.29□□□□□ -1.24
VPS26A-206ENST00000489794 PLP2Q04941 152 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 MLC1Q15049 377 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 LRRC41Q15345 812 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 GFOD2Q3B7J2 385 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 C3orf36Q3SXR2 165 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 MDM1Q8TC05 714 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 MIEF2Q96C03 454 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 MVB12AQ96EY5 273 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 TMEM176AQ96HP8 235 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 BDH2Q9BUT1 245 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 GTPBP4Q9BZE4 634 aaKnown RBP7.29□□□□□ -1.24
VPS26A-206ENST00000489794 GEMIN8Q9NWZ8 242 aaKnown RBP7.29□□□□□ -1.24
VPS26A-206ENST00000489794 SIK3Q9Y2K2 1263 aa7.29□□□□□ -1.24
VPS26A-206ENST00000489794 B8ZZF3 427 aa7.28□□□□□ -1.24
VPS26A-206ENST00000489794 MARCH6O60337 910 aa7.28□□□□□ -1.24
VPS26A-206ENST00000489794 ZNF623O75123 536 aa7.28□□□□□ -1.24
VPS26A-206ENST00000489794 ALOX15P16050 662 aaPredicted RBP7.28□□□□□ -1.24
VPS26A-206ENST00000489794 FOXL1Q12952 345 aa7.28□□□□□ -1.24
VPS26A-206ENST00000489794 EPM2AIP1Q7L775 607 aaPredicted RBP7.28□□□□□ -1.24
VPS26A-206ENST00000489794 CCHCR1Q8TD31 782 aa7.28□□□□□ -1.24
VPS26A-206ENST00000489794 NSUN6Q8TEA1 469 aaKnown RBP7.28□□□□□ -1.24
VPS26A-206ENST00000489794 ST8SIA2Q92186 375 aa7.28□□□□□ -1.24
VPS26A-206ENST00000489794 SLC12A5Q9H2X9 1139 aa7.28□□□□□ -1.24
VPS26A-206ENST00000489794 AJAP1Q9UKB5 411 aaPredicted RBP7.28□□□□□ -1.24
VPS26A-206ENST00000489794 NOB1Q9ULX3 412 aaKnown RBP7.28□□□□□ -1.24
VPS26A-206ENST00000489794 TCAF1Q9Y4C2 921 aa7.28□□□□□ -1.24
VPS26A-206ENST00000489794 PCDHA13Q9Y5I0 950 aa7.28□□□□□ -1.24
VPS26A-206ENST00000489794 MYBBP1AQ9BQG0 1328 aaKnown RBP7.27□□□□□ -1.24
VPS26A-206ENST00000489794 PRR5-ARHGAP8B1AHC4 643 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 PRRG2O14669 202 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 AP1G1O43747 822 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 SYN1P17600 705 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 DDCP20711 480 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 MTM1Q13496 603 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 IL10RAQ13651 578 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 ELAVL1Q15717 326 aaKnown RBP7.27□□□□□ -1.25
VPS26A-206ENST00000489794 DCAF17Q5H9S7 520 aaPredicted RBP7.27□□□□□ -1.25
VPS26A-206ENST00000489794 CCDC181Q5TID7 509 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 OTUD7BQ6GQQ9 843 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 CATIPQ7Z7H3 387 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 GSPT2Q8IYD1 628 aaKnown RBP7.27□□□□□ -1.25
VPS26A-206ENST00000489794 CHST13Q8NET6 341 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 SLC35G2Q8TBE7 412 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 FAM167AQ96KS9 214 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 C8orf48Q96LL4 319 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 C20orf173Q96LM9 149 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 SH3BP1Q9Y3L3 701 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 NCANO14594 1321 aa7.27□□□□□ -1.25
VPS26A-206ENST00000489794 ZMYM3Q14202 1370 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 KIF3BO15066 747 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 FTH1P19P0C7X4 201 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 MGAT1P26572 445 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 CTXN1P60606 82 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 GADL1Q6ZQY3 521 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 SGMS1Q86VZ5 419 aa7.26□□□□□ -1.25
VPS26A-206ENST00000489794 WDR75Q8IWA0 830 aaKnown RBP7.26□□□□□ -1.25
VPS26A-206ENST00000489794 C3orf20Q8ND61 904 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms