RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 RNF207Q6ZRF8 634 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 TSHZ1Q6ZSZ6 1077 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 LARP4Q71RC2 724 aaKnown RBP eCLIP5.46□□□□□ -1.54
XRN1-213ENST00000489241 POLNQ7Z5Q5 900 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 SLC41A1Q8IVJ1 513 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 GLB1L2Q8IW92 636 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 THEMISQ8N1K5 641 aaPredicted RBP5.46□□□□□ -1.54
XRN1-213ENST00000489241 ZBTB34Q8NCN2 500 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 DIS3LQ8TF46 1054 aaKnown RBP5.46□□□□□ -1.54
XRN1-213ENST00000489241 FATE1Q969F0 183 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 NKD2Q969F2 451 aaPredicted RBP5.46□□□□□ -1.54
XRN1-213ENST00000489241 COA7Q96BR5 231 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 IL17RAQ96F46 866 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 UIMC1Q96RL1 719 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 ACO2Q99798 780 aaKnown RBP5.46□□□□□ -1.54
XRN1-213ENST00000489241 MRIQ9BWK5 157 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 OR10A2Q9H208 303 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 IFT122Q9HBG6 1241 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 DPP7Q9UHL4 492 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 CDY2AQ9Y6F7 541 aa5.46□□□□□ -1.54
XRN1-213ENST00000489241 RHCEP18577 417 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 PDCP20941 246 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 RHDQ02161 417 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 DUSP8Q13202 625 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 ADAM15Q13444 863 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 MORC3Q14149 939 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 ANO4Q32M45 955 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 UAP1L1Q3KQV9 507 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 AGBL4Q5VU57 503 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 USP45Q70EL2 814 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 GRAMD1CQ8IYS0 662 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 FAM43AQ8N2R8 423 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 PRR18Q8N4B5 295 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 PLA2G15Q8NCC3 412 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 PPP1R14CQ8TAE6 165 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 GCDHQ92947 438 aaPredicted RBP5.45□□□□□ -1.54
XRN1-213ENST00000489241 OR14A2Q96R54 314 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 STRBPQ96SI9 672 aaKnown RBP5.45□□□□□ -1.54
XRN1-213ENST00000489241 MAP3K14Q99558 947 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 KIAA1683Q9H0B3 1180 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 PCED1AQ9H1Q7 454 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 EVLQ9UI08 416 aaPredicted RBP5.45□□□□□ -1.54
XRN1-213ENST00000489241 TAGLN3Q9UI15 199 aa5.45□□□□□ -1.54
XRN1-213ENST00000489241 A0A0A6YYK5 440 aaPredicted RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 MATN2O00339 956 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 PMM2O15305 246 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 SEC24DO94855 1032 aaPredicted RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 ACO1P21399 889 aaKnown RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 RPS19P39019 145 aaKnown RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 FOXE3Q13461 319 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 SAFB2Q14151 953 aaKnown RBP eCLIP5.44□□□□□ -1.54
XRN1-213ENST00000489241 NRN1LQ496H8 165 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 LONRF3Q496Y0 759 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 MIIPQ5JXC2 388 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 GJC2Q5T442 439 aaPredicted RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 C10orf62Q5T681 223 aaPredicted RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 GAREM2Q75VX8 874 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 OVCH2Q7RTZ1 564 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 UNC5BQ8IZJ1 945 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 SPICE1Q8N0Z3 855 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.44□□□□□ -1.54
XRN1-213ENST00000489241 PPP1R35Q8TAP8 253 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 MVB12AQ96EY5 273 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 FAM89AQ96GI7 184 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 FAM193BQ96PV7 902 aaPredicted RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 SOX7Q9BT81 388 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 PLA2G12BQ9BX93 195 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 ACE2Q9BYF1 805 aaPredicted RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 ZNF341Q9BYN7 854 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.44□□□□□ -1.54
XRN1-213ENST00000489241 PUF60Q9UHX1 559 aaKnown RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 CTDP1Q9Y5B0 961 aaPredicted RBP5.44□□□□□ -1.54
XRN1-213ENST00000489241 HS3ST3A1Q9Y663 406 aa5.44□□□□□ -1.54
XRN1-213ENST00000489241 IFRD1O00458 451 aaPredicted RBP5.43□□□□□ -1.54
XRN1-213ENST00000489241 TPP1O14773 563 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 CREB3O43889 395 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 TUSC2O75896 110 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 ZBED1O96006 694 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 HRGP04196 525 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 HNRNPLP14866 589 aaKnown RBP eCLIP5.43□□□□□ -1.54
XRN1-213ENST00000489241 EDNRBP24530 442 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 ZNF280AP59817 542 aaPredicted RBP5.43□□□□□ -1.54
XRN1-213ENST00000489241 MEF2AQ02078 507 aaPredicted RBP5.43□□□□□ -1.54
XRN1-213ENST00000489241 CD69Q07108 199 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 MGAT5Q09328 741 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 LLGL1Q15334 1064 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 TBR1Q16650 682 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 USP39Q53GS9 565 aaKnown RBP5.43□□□□□ -1.54
XRN1-213ENST00000489241 SRGAP1Q7Z6B7 1085 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 CFHR4Q92496 578 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 SLC7A6OSQ96CW6 309 aaPredicted RBP5.43□□□□□ -1.54
XRN1-213ENST00000489241 C1GALT1C1Q96EU7 318 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 C12orf65Q9H3J6 166 aaKnown RBP5.43□□□□□ -1.54
XRN1-213ENST00000489241 C14orf93Q9H972 538 aaKnown RBP5.43□□□□□ -1.54
XRN1-213ENST00000489241 LIMCH1Q9UPQ0 1083 aa5.43□□□□□ -1.54
XRN1-213ENST00000489241 RBM8AQ9Y5S9 174 aaKnown RBP5.43□□□□□ -1.54
XRN1-213ENST00000489241 C2orf78A6NCI8 922 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 H3BML4 177 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 LY86O95711 162 aa5.42□□□□□ -1.54
XRN1-213ENST00000489241 GAAP10253 952 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms