RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 ZNF574Q6ZN55 896 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 SPRED2Q7Z698 418 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 ZSWIM2Q8NEG5 633 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 SMCR8Q8TEV9 937 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 KCTD13Q8WZ19 329 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 C12orf42Q96LP6 360 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 FCRL3Q96P31 734 aaPredicted RBP9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 UBAC1Q9BSL1 405 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 SLC12A9Q9BXP2 914 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 NKX2-4Q9H2Z4 354 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 VCPKMTQ9H867 229 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 INCENPQ9NQS7 918 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 TCP11L1Q9NUJ3 509 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 MTMR4Q9NYA4 1195 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 SYNPO2Q9UMS6 1093 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 TMX2Q9Y320 296 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 BACE2Q9Y5Z0 518 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 LAMA4Q16363 1823 aa9.33□□□□□ -0.92
TRAPPC12-221ENST00000489032 NEDD4P46934 1319 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 IGKV6D-41A0A0C4DH26 115 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 E7EWF7 191 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 SLC27A2O14975 620 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 PRODHO43272 600 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 CLSTN1O94985 981 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 ECI1P42126 302 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 SMAD3P84022 425 aaKnown RBP9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 PLCL1Q15111 1095 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 NECTIN1Q15223 517 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 LRRC26Q2I0M4 334 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 NSMFQ6X4W1 530 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 TTC14Q96N46 770 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 IER2Q9BTL4 223 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 C1QTNF1Q9BXJ1 281 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 TTYH1Q9H313 450 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 AP5S1Q9NUS5 200 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 SLAMF8Q9P0V8 285 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 ISY1Q9ULR0 285 aaKnown RBP9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 MRPL42Q9Y6G3 142 aaKnown RBP9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 PHIPQ8WWQ0 1821 aa9.32□□□□□ -0.92
TRAPPC12-221ENST00000489032 A0A1W2PRG0 241 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 F5H6K3 240 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 AURKAO14965 403 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 WDR46O15213 610 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 TBX1O43435 398 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 FAM153BP0C7A2 387 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 TOP1P11387 765 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 COL6A1P12109 1028 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 IFNGR1P15260 489 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 VCAM1P19320 739 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 HOXA7P31268 230 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 ANP32AP39687 249 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 GCLCP48506 637 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 TEKQ02763 1124 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 KLRC3Q07444 240 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 SCRN1Q12765 414 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 DUSP4Q13115 394 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 TREML2Q5T2D2 321 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 EEF1DP3Q658K8 133 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 DGKHQ86XP1 1220 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 SCUBE1Q8IWY4 988 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 ATXN2LQ8WWM7 1075 aaKnown RBP9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 ALPK1Q96QP1 1244 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 RPAP3Q9H6T3 665 aaPredicted RBP9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 KAT14Q9H8E8 782 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 ARHGEF4Q9NR80 690 aa9.31□□□□□ -0.92
TRAPPC12-221ENST00000489032 DNAH12Q6ZR08 3092 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 CCDC163A0A0D9SF12 145 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 IFIT3O14879 490 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 NMT2O60551 498 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 HMGB1P09429 215 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 FGFR1P11362 822 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 PSMA5P28066 241 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 MCM5P33992 734 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 COG2Q14746 738 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 SHHQ15465 462 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 IFIT1BQ5T764 474 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 SLFN13Q68D06 897 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 CATSPERGQ6ZRH7 1159 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 HOMER1Q86YM7 354 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 SIAH1Q8IUQ4 282 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 SPICE1Q8N0Z3 855 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 ANKRD13CQ8N6S4 541 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 USP38Q8NB14 1042 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 GMCL1P1Q8NEA9 526 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 SNX27Q96L92 541 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 RNPC3Q96LT9 517 aaKnown RBP9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 NEK1Q96PY6 1258 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 IL17RBQ9NRM6 502 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 HOXC10Q9NYD6 342 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 CTDP1Q9Y5B0 961 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 PTPRFP10586 1907 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 TNKSO95271 1327 aa9.3□□□□□ -0.92
TRAPPC12-221ENST00000489032 LOC285556D6RIA3 1793 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 GREB1LQ9C091 1923 aaPredicted RBP9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 TRBV23OR9-2A0A075B6M9 112 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 TRBV23-1A0A0A0MS06 115 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 FLOT1O75955 427 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 NDUFB10O96000 172 aa9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 PABPC1P11940 636 aaKnown RBP9.29□□□□□ -0.92
TRAPPC12-221ENST00000489032 HSPA4P34932 840 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms