RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 NDC1Q9BTX1 674 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 ADI1Q9BV57 179 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 ZNF768Q9H5H4 540 aaKnown RBP5.03□□□□□ -1.6
RFC4-213ENST00000489028 SORCS3Q9UPU3 1222 aa5.03□□□□□ -1.6
RFC4-213ENST00000489028 TBKBP1A7MCY6 615 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 CXorf49A8MYA2 514 aaPredicted RBP5.02□□□□□ -1.61
RFC4-213ENST00000489028 AHRRA9YTQ3 701 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 B5MCH6 92 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 RPS6KA4O75676 772 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 MYBL2P10244 700 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 RBP3P10745 1247 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 HSP90B1P14625 803 aaKnown RBP5.02□□□□□ -1.61
RFC4-213ENST00000489028 FPR1P21462 350 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 C5AR1P21730 350 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 GUCY1A2P33402 732 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 FAM189BP81408 668 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 ITKQ08881 620 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 MGAT2Q10469 447 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 PCBP2Q15366 365 aaKnown RBP eCLIP5.02□□□□□ -1.61
RFC4-213ENST00000489028 CLUL1Q15846 466 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 BMT2Q1RMZ1 405 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 FAM47AQ5JRC9 791 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 KRTAP5-3Q6L8H2 238 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 PGM2L1Q6PCE3 622 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 PQLC1Q8N2U9 271 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 PPM1NQ8N819 430 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 OR10H5Q8NGA6 315 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 STON2Q8WXE9 905 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 DPF2Q92785 391 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 FAXDC2Q96IV6 333 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 TEX101Q9BY14 249 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 MMRN2Q9H8L6 949 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 SPON1Q9HCB6 807 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 DNM3Q9UQ16 869 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 HDAC5Q9UQL6 1122 aa5.02□□□□□ -1.61
RFC4-213ENST00000489028 PNPLA7Q6ZV29 1317 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 PRR5-ARHGAP8B1AHC4 643 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 PCSK1P29120 753 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 METRNLQ641Q3 311 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 PDZD4Q76G19 769 aaPredicted RBP5.01□□□□□ -1.61
RFC4-213ENST00000489028 AMOTL1Q8IY63 956 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 ZGPATQ8N5A5 531 aaKnown RBP5.01□□□□□ -1.61
RFC4-213ENST00000489028 CPT1CQ8TCG5 803 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 ZNF483Q8TF39 744 aaPredicted RBP5.01□□□□□ -1.61
RFC4-213ENST00000489028 NRG4Q8WWG1 115 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 UHRF1Q96T88 793 aaPredicted RBP5.01□□□□□ -1.61
RFC4-213ENST00000489028 NEU1Q99519 415 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 PCED1AQ9H1Q7 454 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 MKS1Q9NXB0 559 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 CHST2Q9Y4C5 530 aa5.01□□□□□ -1.61
RFC4-213ENST00000489028 TNKSO95271 1327 aa5□□□□□ -1.61
RFC4-213ENST00000489028 WASHC2CQ9Y4E1 1318 aa5□□□□□ -1.61
RFC4-213ENST00000489028 TRIM24O15164 1050 aa5□□□□□ -1.61
RFC4-213ENST00000489028 SCAF4O95104 1147 aaKnown RBP5□□□□□ -1.61
RFC4-213ENST00000489028 AMY1AP04745 511 aa5□□□□□ -1.61
RFC4-213ENST00000489028 GDF5P43026 501 aa5□□□□□ -1.61
RFC4-213ENST00000489028 ALDH1A3P47895 512 aa5□□□□□ -1.61
RFC4-213ENST00000489028 RNASE9P60153 205 aaKnown RBP5□□□□□ -1.61
RFC4-213ENST00000489028 NHLH2Q02577 135 aa5□□□□□ -1.61
RFC4-213ENST00000489028 SP140Q13342 867 aa5□□□□□ -1.61
RFC4-213ENST00000489028 AFMIDQ63HM1 303 aa5□□□□□ -1.61
RFC4-213ENST00000489028 DRICH1Q6PGQ1 229 aaPredicted RBP5□□□□□ -1.61
RFC4-213ENST00000489028 ZNF276Q8N554 614 aa5□□□□□ -1.61
RFC4-213ENST00000489028 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5□□□□□ -1.61
RFC4-213ENST00000489028 TFAP2CQ92754 450 aa5□□□□□ -1.61
RFC4-213ENST00000489028 CLIP3Q96DZ5 547 aa5□□□□□ -1.61
RFC4-213ENST00000489028 FUBP3Q96I24 572 aaKnown RBP eCLIP5□□□□□ -1.61
RFC4-213ENST00000489028 MYOCQ99972 504 aa5□□□□□ -1.61
RFC4-213ENST00000489028 ASPSCR1Q9BZE9 553 aa5□□□□□ -1.61
RFC4-213ENST00000489028 LANCL2Q9NS86 450 aa5□□□□□ -1.61
RFC4-213ENST00000489028 SLC23A1Q9UHI7 598 aa5□□□□□ -1.61
RFC4-213ENST00000489028 EIF2B4Q9UI10 523 aaKnown RBP5□□□□□ -1.61
RFC4-213ENST00000489028 AJAP1Q9UKB5 411 aaPredicted RBP5□□□□□ -1.61
RFC4-213ENST00000489028 ZBTB21Q9ULJ3 1066 aa5□□□□□ -1.61
RFC4-213ENST00000489028 ALG1L2C9J202 215 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 ZNF185O15231 689 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 NDUFS2O75306 463 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 PEX11BO96011 259 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 ZSCAN20P17040 1043 aaPredicted RBP4.99□□□□□ -1.61
RFC4-213ENST00000489028 ABHD18Q0P651 414 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 ODF1Q14990 250 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 ACAP2Q15057 778 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 PTPROQ16827 1216 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 EFCAB12Q6NXP0 572 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 Q6ZPA2 131 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 RHOUQ7L0Q8 258 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 ZNF627Q7L945 461 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 RPUSD2Q8IZ73 545 aaKnown RBP4.99□□□□□ -1.61
RFC4-213ENST00000489028 FAM177A1Q8N128 213 aaPredicted RBP4.99□□□□□ -1.61
RFC4-213ENST00000489028 SLC25A43Q8WUT9 341 aaPredicted RBP4.99□□□□□ -1.61
RFC4-213ENST00000489028 LARP4BQ92615 738 aaKnown RBP4.99□□□□□ -1.61
RFC4-213ENST00000489028 RAB24Q969Q5 203 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 TEKT5Q96M29 485 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 NRDE2Q9H7Z3 1164 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 SRRDQ9UH36 339 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 REXO2Q9Y3B8 237 aaKnown RBP4.99□□□□□ -1.61
RFC4-213ENST00000489028 ACTL7AQ9Y615 435 aa4.99□□□□□ -1.61
RFC4-213ENST00000489028 SHTN1A0MZ66 631 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 CYR61O00622 381 aa4.98□□□□□ -1.61
RFC4-213ENST00000489028 PJA2O43164 708 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms