RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 C1QTNF1Q9BXJ1 281 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 EMILIN2Q9BXX0 1053 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 PTPRHQ9HD43 1115 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 ODF2LQ9ULJ1 636 aa19.2■□□□□ 0.66
ATG3-205ENST00000488910 USP15Q9Y4E8 981 aaPredicted RBP19.2■□□□□ 0.66
ATG3-205ENST00000488910 PLCG1P19174 1290 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 SCP2P22307 547 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 MARCKSP29966 332 aaPredicted RBP19.19■□□□□ 0.66
ATG3-205ENST00000488910 DDIT3P35638 169 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 STRN3Q13033 797 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 KARSQ15046 597 aaKnown RBP19.19■□□□□ 0.66
ATG3-205ENST00000488910 GPBP1Q86WP2 473 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 TMEM161BQ8NDZ6 487 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 RAD54LQ92698 747 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 TARS2Q9BW92 718 aaKnown RBP19.19■□□□□ 0.66
ATG3-205ENST00000488910 BLOC1S4Q9NUP1 217 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 DZANK1Q9NVP4 752 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 GDAQ9Y2T3 454 aa19.19■□□□□ 0.66
ATG3-205ENST00000488910 PI4K2BG5E9Z4 385 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 PTGESO14684 152 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 URODP06132 367 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 GRM5P41594 1212 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 ITIH3Q06033 890 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 FAM173BQ6P4H8 233 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 TAS1R1Q7RTX1 841 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 GPR65Q8IYL9 337 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 SLC22A17Q8WUG5 538 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 KCNN1Q92952 543 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 KLHL5Q96PQ7 755 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 TCHPQ9BT92 498 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 PHF7Q9BWX1 381 aaPredicted RBP19.18■□□□□ 0.66
ATG3-205ENST00000488910 CCDC39Q9UFE4 941 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 FBXO2Q9UK22 296 aaPredicted RBP19.18■□□□□ 0.66
ATG3-205ENST00000488910 ADAM28Q9UKQ2 775 aa19.18■□□□□ 0.66
ATG3-205ENST00000488910 NPHP3-ACAD11A0A0J9YXS1 232 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 TADA2AO75478 443 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 BRD1O95696 1058 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 CNPP09543 421 aaKnown RBP19.17■□□□□ 0.66
ATG3-205ENST00000488910 MAPTP10636 758 aaKnown RBP19.17■□□□□ 0.66
ATG3-205ENST00000488910 MCF2P10911 925 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 ALADP13716 330 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 PROZP22891 400 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 KLRC2P26717 231 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 GLUD2P49448 558 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 YARSP54577 528 aaKnown RBP19.17■□□□□ 0.66
ATG3-205ENST00000488910 DSG1Q02413 1049 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 CEBPZQ03701 1054 aaKnown RBP19.17■□□□□ 0.66
ATG3-205ENST00000488910 MCM6Q14566 821 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 HSP90AA2PQ14568 343 aaPredicted RBP19.17■□□□□ 0.66
ATG3-205ENST00000488910 SLC39A14Q15043 492 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 ZNF568Q3ZCX4 644 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 KIAA0319Q5VV43 1072 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 KIAA1841Q6NSI8 718 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 CES5AQ6NT32 575 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 EPSTI1Q96J88 318 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 CCDC94Q9BW85 323 aaPredicted RBP19.17■□□□□ 0.66
ATG3-205ENST00000488910 CDT1Q9H211 546 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 ADAM7Q9H2U9 754 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 EPHX3Q9H6B9 360 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 TOPORSQ9NS56 1045 aaPredicted RBP19.17■□□□□ 0.66
ATG3-205ENST00000488910 CHST7Q9NS84 486 aa19.17■□□□□ 0.66
ATG3-205ENST00000488910 TOM1L1O75674 476 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 HSP90AA1P07900 732 aaKnown RBP19.16■□□□□ 0.66
ATG3-205ENST00000488910 TXLNAP40222 546 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 ZNF131P52739 623 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 NCKAP1LP55160 1127 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 DHX8Q14562 1220 aaKnown RBP19.16■□□□□ 0.66
ATG3-205ENST00000488910 CBX2Q14781 532 aaPredicted RBP19.16■□□□□ 0.66
ATG3-205ENST00000488910 NAB2Q15742 525 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 USP41Q3LFD5 358 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 FUT10Q6P4F1 479 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 MPZL3Q6UWV2 235 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 ZPBP2Q6X784 338 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 LRRC15Q8TF66 581 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 LARP4BQ92615 738 aaKnown RBP19.16■□□□□ 0.66
ATG3-205ENST00000488910 KHSRPQ92945 711 aaKnown RBP eCLIP19.16■□□□□ 0.66
ATG3-205ENST00000488910 USP28Q96RU2 1077 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 REEP2Q9BRK0 252 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 GPR62Q9BZJ7 368 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 PARVGQ9HBI0 331 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 RXFP1Q9HBX9 757 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 STK17AQ9UEE5 414 aa19.16■□□□□ 0.66
ATG3-205ENST00000488910 LOC730098B7Z3J9 87 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 F8W810 466 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 C2CD2LO14523 706 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 FAM13AO94988 1023 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 C1RP00736 705 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 KRT18P05783 430 aaKnown RBP19.15■□□□□ 0.66
ATG3-205ENST00000488910 EPCAMP16422 314 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 ABCD1P33897 745 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 CLCN4P51793 760 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 CACNB1Q02641 598 aaPredicted RBP19.15■□□□□ 0.66
ATG3-205ENST00000488910 XKR4Q5GH76 650 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 SPECC1Q5M775 1068 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 ALKAL1Q6UXT8 129 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 USP49Q70CQ1 688 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 HAUS6Q7Z4H7 955 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 ZBTB33Q86T24 672 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 MYCT1Q8N699 235 aa19.15■□□□□ 0.66
ATG3-205ENST00000488910 KRI1Q8N9T8 703 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms