RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 PLEKHA4Q9H4M7 779 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 CACNG4Q9UBN1 327 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 WDR87Q6ZQQ6 2873 aa20.38■□□□□ 0.85
HDAC6-231ENST00000488905 SPTBN4Q9H254 2564 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 N4BP3O15049 544 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 SPATA31D3P0C874 917 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 TUSC3Q13454 348 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 HSP90AA2PQ14568 343 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-231ENST00000488905 SPATA31D4Q6ZUB0 917 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 PALB2Q86YC2 1186 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 GLYCTKQ8IVS8 523 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 ERMNQ8TAM6 284 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 RIN2Q8WYP3 895 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-231ENST00000488905 BSNDQ8WZ55 320 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 NACC1Q96RE7 527 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 PAAF1Q9BRP4 392 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 PDZD7Q9H5P4 517 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 ZDHHC7Q9NXF8 308 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 EPS15L1Q9UBC2 864 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 FBXL21Q9UKT6 434 aa20.37■□□□□ 0.85
HDAC6-231ENST00000488905 TTLL13PA6NNM8 815 aa20.36■□□□□ 0.85
HDAC6-231ENST00000488905 PROB1E7EW31 1015 aa20.36■□□□□ 0.85
HDAC6-231ENST00000488905 NARSO43776 548 aaKnown RBP20.36■□□□□ 0.85
HDAC6-231ENST00000488905 OR52Z1P0C646 297 aa20.36■□□□□ 0.85
HDAC6-231ENST00000488905 RPL17P18621 184 aaKnown RBP20.36■□□□□ 0.85
HDAC6-231ENST00000488905 AOC1P19801 751 aa20.36■□□□□ 0.85
HDAC6-231ENST00000488905 ORC2Q13416 577 aaPredicted RBP20.36■□□□□ 0.85
HDAC6-231ENST00000488905 PPP4R2Q9NY27 417 aa20.36■□□□□ 0.85
HDAC6-231ENST00000488905 CITO14578 2027 aa20.36■□□□□ 0.85
HDAC6-231ENST00000488905 ARHGEF35A5YM69 484 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 CASTOR2A6NHX0 329 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 EIF5BO60841 1220 aaKnown RBP20.35■□□□□ 0.85
HDAC6-231ENST00000488905 TADA2AO75478 443 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 KIF4AO95239 1232 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 PRKCBP05771 671 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 NPR3P17342 541 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 RPA1P27694 616 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 PRPF4BQ13523 1007 aaKnown RBP20.35■□□□□ 0.85
HDAC6-231ENST00000488905 MAPK6Q16659 721 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 TMEM132AQ24JP5 1023 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 RTP2Q5QGT7 225 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 LILRA6Q6PI73 481 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 PADI6Q6TGC4 694 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 SIX5Q8N196 739 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 HASPINQ8TF76 798 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 RSAD2Q8WXG1 361 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 C8orf76Q96K31 380 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 MYADMQ96S97 322 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 CCDC113Q9H0I3 377 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 NT5C3AQ9H0P0 336 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 PIDD1Q9HB75 910 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 SNTG2Q9NY99 539 aa20.35■□□□□ 0.85
HDAC6-231ENST00000488905 MYH11P35749 1972 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 PTGESO14684 152 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 RECQL4O94761 1208 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 EDN1P05305 212 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 NBL1P41271 181 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 NAMPTP43490 491 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 HAUS3Q68CZ6 603 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 PRSS55Q6UWB4 352 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-231ENST00000488905 GET4Q7L5D6 327 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-231ENST00000488905 CCDC83Q8IWF9 413 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 ADPGKQ9BRR6 497 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 PRKD2Q9BZL6 878 aa20.34■□□□□ 0.85
HDAC6-231ENST00000488905 FOXP1Q9H334 677 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-231ENST00000488905 MIA3Q5JRA6 1907 aa20.33■□□□□ 0.85
HDAC6-231ENST00000488905 THP07101 528 aa20.33■□□□□ 0.85
HDAC6-231ENST00000488905 CYP11B2P19099 503 aa20.33■□□□□ 0.85
HDAC6-231ENST00000488905 ZNF174Q15697 407 aa20.33■□□□□ 0.85
HDAC6-231ENST00000488905 DEPTORQ8TB45 409 aa20.33■□□□□ 0.85
HDAC6-231ENST00000488905 RTP3Q9BQQ7 232 aa20.33■□□□□ 0.85
HDAC6-231ENST00000488905 TTPALQ9BTX7 342 aa20.33■□□□□ 0.85
HDAC6-231ENST00000488905 FBXW11Q9UKB1 542 aa20.33■□□□□ 0.85
HDAC6-231ENST00000488905 DCHS1Q96JQ0 3298 aa20.33■□□□□ 0.85
HDAC6-231ENST00000488905 PDCD11Q14690 1871 aaKnown RBP20.33■□□□□ 0.84
HDAC6-231ENST00000488905 GVINP1Q7Z2Y8 2422 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 ACKR2O00590 384 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 PI15O43692 258 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 ZMYND10O75800 440 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 CFHP08603 1231 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 LIG1P18858 919 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 MUTP22033 750 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 PPP2R5AQ15172 486 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 NAB2Q15742 525 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 PSMD5Q16401 504 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 TTC38Q5R3I4 469 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 ASCL5Q7RTU5 278 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 NOSTRINQ8IVI9 506 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 CCDC105Q8IYK2 499 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 PIK3R5Q8WYR1 880 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 NXPE3Q969Y0 559 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 LLPHQ9BRT6 129 aaKnown RBP20.32■□□□□ 0.84
HDAC6-231ENST00000488905 KIFC3Q9BVG8 833 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 CXCL16Q9H2A7 254 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.32■□□□□ 0.84
HDAC6-231ENST00000488905 WNT16Q9UBV4 365 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 LIMCH1Q9UPQ0 1083 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 USP20Q9Y2K6 914 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 FRYLO94915 3013 aa20.32■□□□□ 0.84
HDAC6-231ENST00000488905 NOTCH4Q99466 2003 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms