RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 HARSP12081 509 aaKnown RBP16.48■□□□□ 0.23
CXCL12-207ENST00000488591 PBX3P40426 434 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 SYKP43405 635 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 AFF1P51825 1210 aaKnown RBP16.48■□□□□ 0.23
CXCL12-207ENST00000488591 GRIK3Q13003 919 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 ALCAMQ13740 583 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 NOLC1Q14978 699 aaKnown RBP eCLIP16.48■□□□□ 0.23
CXCL12-207ENST00000488591 PDE12Q6L8Q7 609 aaKnown RBP16.48■□□□□ 0.23
CXCL12-207ENST00000488591 CNNM4Q6P4Q7 775 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 STXBP4Q6ZWJ1 553 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 ZBTB45Q96K62 511 aaPredicted RBP16.48■□□□□ 0.23
CXCL12-207ENST00000488591 ACAP3Q96P50 834 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 FIZ1Q96SL8 496 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 NSUN3Q9H649 340 aaKnown RBP16.48■□□□□ 0.23
CXCL12-207ENST00000488591 MIOSQ9NXC5 875 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 TBC1D7Q9P0N9 293 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 DNAJB4Q9UDY4 337 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 STK39Q9UEW8 545 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 SERTAD1Q9UHV2 236 aa16.48■□□□□ 0.23
CXCL12-207ENST00000488591 PRRC2BQ5JSZ5 2229 aaKnown RBP16.47■□□□□ 0.23
CXCL12-207ENST00000488591 NT5C1B-RDH14C9J2C7 533 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 GCNT3O95395 438 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 PIGRP01833 764 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 THP07101 528 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 AFMP43652 599 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 SLC11A1P49279 550 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 OSTNP61366 133 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 MCL1Q07820 350 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 KYAT1Q16773 422 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 ZC2HC1CQ53FD0 456 aaPredicted RBP16.47■□□□□ 0.23
CXCL12-207ENST00000488591 SLFN12LQ6IEE8 588 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 MAP4K3Q8IVH8 894 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 COLGALT2Q8IYK4 626 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 ACCSQ96QU6 501 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 TLR9Q9NR96 1032 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 CHMP5Q9NZZ3 219 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 HPSEQ9Y251 543 aa16.47■□□□□ 0.23
CXCL12-207ENST00000488591 TDRD15B5MCY1 1934 aaKnown RBP16.47■□□□□ 0.23
CXCL12-207ENST00000488591 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.46■□□□□ 0.23
CXCL12-207ENST00000488591 FAM237AA0A1B0GTK4 181 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 ABLIM1O14639 778 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 CSPG5O95196 566 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 DNAJB1P25685 340 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 OR1G1P47890 313 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 NDUFA8P51970 172 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 COASYQ13057 564 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 SYCP3Q8IZU3 236 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 GSTCDQ8NEC7 633 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 CCDC34Q96HJ3 373 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 IGSF21Q96ID5 467 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 COLEC11Q9BWP8 271 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 CDH23Q9H251 3354 aa16.46■□□□□ 0.23
CXCL12-207ENST00000488591 PLXNA4Q9HCM2 1894 aa16.46■□□□□ 0.22
CXCL12-207ENST00000488591 PVALEFA0A1B0GWK0 134 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 NRP1O14786 923 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 NCK2O43639 380 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 ACTN4O43707 911 aaKnown RBP16.45■□□□□ 0.22
CXCL12-207ENST00000488591 MYL1P05976 194 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 DSC1Q08554 894 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 TUSC3Q13454 348 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 CAMK1Q14012 370 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 POSTNQ15063 836 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 TCEAL5Q5H9L2 206 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 L1TD1Q5T7N2 865 aaKnown RBP16.45■□□□□ 0.22
CXCL12-207ENST00000488591 UNC13DQ70J99 1090 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 TMC7Q7Z402 723 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 DDX53Q86TM3 631 aaKnown RBP16.45■□□□□ 0.22
CXCL12-207ENST00000488591 CEP120Q8N960 986 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 PAGE5Q96GU1 130 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 BLZF1Q9H2G9 400 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 TMEM206Q9H813 350 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 NGRNQ9NPE2 291 aaKnown RBP16.45■□□□□ 0.22
CXCL12-207ENST00000488591 ENTPD7Q9NQZ7 604 aa16.45■□□□□ 0.22
CXCL12-207ENST00000488591 PTGESO14684 152 aa16.44■□□□□ 0.22
CXCL12-207ENST00000488591 OGTO15294 1046 aa16.44■□□□□ 0.22
CXCL12-207ENST00000488591 PPP1R37O75864 691 aa16.44■□□□□ 0.22
CXCL12-207ENST00000488591 CLTAP09496 248 aa16.44■□□□□ 0.22
CXCL12-207ENST00000488591 MYBP10242 640 aa16.44■□□□□ 0.22
CXCL12-207ENST00000488591 TCF25Q9BQ70 676 aa16.44■□□□□ 0.22
CXCL12-207ENST00000488591 MSTO1Q9BUK6 570 aa16.44■□□□□ 0.22
CXCL12-207ENST00000488591 STRA6Q9BX79 667 aa16.44■□□□□ 0.22
CXCL12-207ENST00000488591 COG5Q9UP83 839 aa16.44■□□□□ 0.22
CXCL12-207ENST00000488591 PRG3Q9Y2Y8 225 aaPredicted RBP16.44■□□□□ 0.22
CXCL12-207ENST00000488591 A0A0B4J269 797 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 SMIM28A0A1B0GU29 152 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 B4GALT3O60512 393 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 ZNF202O95125 648 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 IRS1P35568 1242 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 ERVFC1P60507 584 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 CUL4BQ13620 913 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 SMC1AQ14683 1233 aaKnown RBP16.43■□□□□ 0.22
CXCL12-207ENST00000488591 FAM26FQ5R3K3 315 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 KANK3Q6NY19 840 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 ALKAL1Q6UXT8 129 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 GRAMD1CQ8IYS0 662 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 VPS52Q8N1B4 723 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 TMEM87AQ8NBN3 555 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 HLA-CQ95604 372 aa16.43■□□□□ 0.22
CXCL12-207ENST00000488591 CCDC47Q96A33 483 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms