RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 SENP6Q9GZR1 1112 aaPredicted RBP5.72□□□□□ -1.49
ITGB1-214ENST00000488427 CSRNP2Q9H175 543 aa5.72□□□□□ -1.49
ITGB1-214ENST00000488427 PRDM12Q9H4Q4 367 aa5.72□□□□□ -1.49
ITGB1-214ENST00000488427 PCDHGA2Q9Y5H1 932 aa5.72□□□□□ -1.49
ITGB1-214ENST00000488427 E2F8A0AVK6 867 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 PJA2O43164 708 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 AKAP8O43823 692 aaKnown RBP5.71□□□□□ -1.5
ITGB1-214ENST00000488427 SNRPA1P09661 255 aaKnown RBP5.71□□□□□ -1.5
ITGB1-214ENST00000488427 ADSLP30566 484 aaPredicted RBP5.71□□□□□ -1.5
ITGB1-214ENST00000488427 PTPN7P35236 360 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 WASP42768 502 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 ZXDAP98168 799 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 SP140Q13342 867 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 BRDTQ58F21 947 aaPredicted RBP5.71□□□□□ -1.5
ITGB1-214ENST00000488427 RRP12Q5JTH9 1297 aaKnown RBP5.71□□□□□ -1.5
ITGB1-214ENST00000488427 ABHD15Q6UXT9 468 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 PALM2Q8IXS6 379 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 PQLC1Q8N2U9 271 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 MIER2Q8N344 545 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 CBARPQ8N350 705 aaPredicted RBP5.71□□□□□ -1.5
ITGB1-214ENST00000488427 ZFP28Q8NHY6 868 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 ATXN2LQ8WWM7 1075 aaKnown RBP5.71□□□□□ -1.5
ITGB1-214ENST00000488427 CASKIN2Q8WXE0 1202 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 FAM193BQ96PV7 902 aaPredicted RBP5.71□□□□□ -1.5
ITGB1-214ENST00000488427 GPR87Q9BY21 358 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 ASPSCR1Q9BZE9 553 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 TRIM8Q9BZR9 551 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 ENKD1Q9H0I2 346 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 SCOCQ9UIL1 159 aa5.71□□□□□ -1.5
ITGB1-214ENST00000488427 LOC105371045A0A1W2PR82 267 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 NDUFS2O75306 463 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 CT47B1P0C2W7 299 aaPredicted RBP5.7□□□□□ -1.5
ITGB1-214ENST00000488427 TNFRSF1AP19438 455 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 ADKP55263 362 aaKnown RBP5.7□□□□□ -1.5
ITGB1-214ENST00000488427 EVA1CP58658 441 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 ACAP1Q15027 740 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 EFCAB12Q6NXP0 572 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 MB21D1Q8N884 522 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 WWC2-AS2Q96NR7 200 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 REXO4Q9GZR2 422 aaKnown RBP5.7□□□□□ -1.5
ITGB1-214ENST00000488427 MAN1C1Q9NR34 630 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 DDX56Q9NY93 547 aaKnown RBP5.7□□□□□ -1.5
ITGB1-214ENST00000488427 TRPS1Q9UHF7 1281 aa5.7□□□□□ -1.5
ITGB1-214ENST00000488427 PCF11O94913 1555 aaKnown RBP5.7□□□□□ -1.5
ITGB1-214ENST00000488427 TARBP1Q13395 1621 aaKnown RBP5.7□□□□□ -1.5
ITGB1-214ENST00000488427 PEX11BO96011 259 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 PDGFRBP09619 1106 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 SPATA31D3P0C874 917 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 NEK2P51955 445 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 MXRA7P84157 204 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 R3HDM1Q15032 1099 aaKnown RBP5.69□□□□□ -1.5
ITGB1-214ENST00000488427 NRN1LQ496H8 165 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 FAM47AQ5JRC9 791 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 NAIF1Q69YI7 327 aaPredicted RBP5.69□□□□□ -1.5
ITGB1-214ENST00000488427 DRICH1Q6PGQ1 229 aaPredicted RBP5.69□□□□□ -1.5
ITGB1-214ENST00000488427 Q6ZSN1 163 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 SPATA31D4Q6ZUB0 917 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 ZNF572Q7Z3I7 529 aaPredicted RBP5.69□□□□□ -1.5
ITGB1-214ENST00000488427 DRC7Q8IY82 874 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.69□□□□□ -1.5
ITGB1-214ENST00000488427 MDM1Q8TC05 714 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 JADE3Q92613 823 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 TEKT5Q96M29 485 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 CCDC8Q9H0W5 538 aaPredicted RBP5.69□□□□□ -1.5
ITGB1-214ENST00000488427 SRRDQ9UH36 339 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 MAPKBP1O60336 1514 aa5.69□□□□□ -1.5
ITGB1-214ENST00000488427 DIRC3C9JPN6 131 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 TRIM24O15164 1050 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 SUV39H1O43463 412 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 SGTAO43765 313 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 GPR32O75388 356 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 ALAS1P13196 640 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 CREMQ03060 361 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 TMEM240Q5SV17 173 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 PRAMEF14Q5SWL7 426 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 THEMIS2Q5TEJ8 643 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 RNF207Q6ZRF8 634 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 USP51Q70EK9 711 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 RSPH3Q86UC2 560 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 TMPRSS6Q8IU80 811 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 C1orf210Q8IVY1 113 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 ELOA2Q8IYF1 753 aaPredicted RBP5.68□□□□□ -1.5
ITGB1-214ENST00000488427 PPM1NQ8N819 430 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 SH3RF3Q8TEJ3 882 aaPredicted RBP5.68□□□□□ -1.5
ITGB1-214ENST00000488427 TFAP2CQ92754 450 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 DCLRE1CQ96SD1 692 aaKnown RBP5.68□□□□□ -1.5
ITGB1-214ENST00000488427 NUP88Q99567 741 aaPredicted RBP5.68□□□□□ -1.5
ITGB1-214ENST00000488427 AASDHPPTQ9NRN7 309 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 TDP1Q9NUW8 608 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 INTUQ9ULD6 942 aa5.68□□□□□ -1.5
ITGB1-214ENST00000488427 CFAP20Q9Y6A4 193 aaKnown RBP5.68□□□□□ -1.5
ITGB1-214ENST00000488427 CFTRP13569 1480 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 SNAPC4Q5SXM2 1469 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 MATN3O15232 486 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 U2AF1L5P0DN76 240 aaPredicted RBP5.67□□□□□ -1.5
ITGB1-214ENST00000488427 EPHB1P54762 984 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 CLRN1P58418 232 aa5.67□□□□□ -1.5
ITGB1-214ENST00000488427 U2AF1Q01081 240 aaKnown RBP eCLIP5.67□□□□□ -1.5
ITGB1-214ENST00000488427 KIF23Q02241 960 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms