RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 UPP2O95045 317 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 NR3C1P04150 777 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 FGFR4P22455 802 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 ATP5DP30049 168 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 RAD23BP54727 409 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 MTHFD1LQ6UB35 978 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 APBB1IPQ7Z5R6 666 aaPredicted RBP15.22■□□□□ 0.03
RER1-207ENST00000488353 ERMNQ8TAM6 284 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 SLC35G2Q8TBE7 412 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 U2AF1L4Q8WU68 220 aaKnown RBP15.22■□□□□ 0.03
RER1-207ENST00000488353 ARHGEF2Q92974 986 aaKnown RBP15.22■□□□□ 0.03
RER1-207ENST00000488353 RMDN2Q96LZ7 410 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 RUSC1Q9BVN2 902 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 CTNNAL1Q9UBT7 734 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 DDX3XO00571 662 aaKnown RBP eCLIP15.22■□□□□ 0.031e-6■□□□□ 10.3
RER1-207ENST00000488353 KRT13P13646 458 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 KCNA3P22001 575 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 RPA1P27694 616 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 POLD1P28340 1107 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 CHRNA3P32297 505 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 RPL21P46778 160 aaKnown RBP15.22■□□□□ 0.03
RER1-207ENST00000488353 KLC1Q07866 573 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 EPHA7Q15375 998 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 RFFLQ8WZ73 363 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 UTP4Q969X6 686 aaKnown RBP15.22■□□□□ 0.03
RER1-207ENST00000488353 TAOK3Q9H2K8 898 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 OSGEPQ9NPF4 335 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 CYP39A1Q9NYL5 469 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 TMOD2Q9NZR1 351 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 GCNT4Q9P109 453 aa15.22■□□□□ 0.03
RER1-207ENST00000488353 GFPT2O94808 682 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 TPBGLP0DKB5 382 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 BMP3P12645 472 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 HSPA6P17066 643 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 PTGIRP43119 386 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 PPATQ06203 517 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 ACVR2BQ13705 512 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 DLGAP5Q15398 846 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 SYDE2Q5VT97 1194 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 EPM2AIP1Q7L775 607 aaPredicted RBP15.21■□□□□ 0.03
RER1-207ENST00000488353 KSR1Q8IVT5 923 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 DRAXINQ8NBI3 349 aaPredicted RBP15.21■□□□□ 0.03
RER1-207ENST00000488353 GMCL1P1Q8NEA9 526 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 ACER1Q8TDN7 264 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 GRAMD1AQ96CP6 724 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 MBOAT7Q96N66 472 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 GLT8D2Q9H1C3 349 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 ZNF70Q9UC06 446 aaPredicted RBP15.21■□□□□ 0.03
RER1-207ENST00000488353 ZMYND8Q9ULU4 1186 aaPredicted RBP15.21■□□□□ 0.03
RER1-207ENST00000488353 ASTN1O14525 1302 aa15.21■□□□□ 0.03
RER1-207ENST00000488353 SPDYE5A6NIY4 337 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 PDXKO00764 312 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 MSH4O15457 936 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 PHF2O75151 1096 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 ALDH3A1P30838 453 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 PEX5P50542 639 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 TSNAXIP1Q2TAA8 658 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 UBAP2Q5T6F2 1119 aaKnown RBP15.21■□□□□ 0.02
RER1-207ENST00000488353 SAMD1Q6SPF0 538 aaPredicted RBP15.21■□□□□ 0.02
RER1-207ENST00000488353 FAM43BQ6ZT52 329 aaPredicted RBP15.21■□□□□ 0.02
RER1-207ENST00000488353 MIGA2Q7L4E1 593 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 AGGF1Q8N302 714 aaeCLIP15.21■□□□□ 0.02
RER1-207ENST00000488353 LENG9Q96B70 501 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 FAM210AQ96ND0 272 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 SERPINB12Q96P63 405 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 SYT15Q9BQS2 421 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 AMNQ9BXJ7 453 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 LRMDAQ9H2I8 198 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 SIX2Q9NPC8 291 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 PCYOX1Q9UHG3 505 aa15.21■□□□□ 0.02
RER1-207ENST00000488353 EML1O00423 815 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 PEX11AO75192 247 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 TBCAO75347 108 aaKnown RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 PDHA1P08559 390 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 ACADSP16219 412 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 ZNF76P36508 570 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 CTTNQ14247 550 aaKnown RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 ZYXQ15942 572 aaKnown RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 VSTM1Q6UX27 236 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 FBXO11Q86XK2 927 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.2■□□□□ 0.02
RER1-207ENST00000488353 OGFOD1Q8N543 542 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 C18orf8Q96DM3 657 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 GMCL1Q96IK5 515 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 TGS1Q96RS0 853 aaKnown RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 TMEM39BQ9GZU3 492 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 VCXQ9H320 206 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 KCNK9Q9NPC2 374 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 NCANO14594 1321 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 ZBTB39O15060 712 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 VIL1P09327 827 aaKnown RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 NMT1P30419 496 aaKnown RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 JAM2P57087 298 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 MGAT5Q09328 741 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 ZC2HC1CQ53FD0 456 aaPredicted RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 TRMT10CQ7L0Y3 403 aaKnown RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 OTUD6AQ7L8S5 288 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 RTKN2Q8IZC4 609 aa15.2■□□□□ 0.02
RER1-207ENST00000488353 ENDOVQ8N8Q3 282 aaKnown RBP15.2■□□□□ 0.02
RER1-207ENST00000488353 SLC17A8Q8NDX2 589 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms