RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 SLC7A14Q8TBB6 771 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 CCDC12Q8WUD4 166 aaPredicted RBP10.35□□□□□ -0.75
COL17A1-207ENST00000488320 DNASE1L2Q92874 299 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 GJA10Q969M2 543 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 CCDC136Q96JN2 1154 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 RIT2Q99578 217 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 CLSTN3Q9BQT9 956 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 TTPALQ9BTX7 342 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 EIF2AQ9BY44 585 aaKnown RBP10.35□□□□□ -0.75
COL17A1-207ENST00000488320 ARRDC1-AS1Q9H2J1 176 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 MINDY3Q9H8M7 445 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 GDE1Q9NZC3 331 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 DNMT3BQ9UBC3 853 aaKnown RBP10.35□□□□□ -0.75
COL17A1-207ENST00000488320 KCNH3Q9ULD8 1083 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 NAP1L2Q9ULW6 460 aaPredicted RBP10.35□□□□□ -0.75
COL17A1-207ENST00000488320 GIT1Q9Y2X7 761 aa10.35□□□□□ -0.75
COL17A1-207ENST00000488320 SF3B1O75533 1304 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL17A1-207ENST00000488320 SGSM2O43147 1006 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 KCNK5O95279 499 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 GNA11P29992 359 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 HOXA9P31269 272 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 CIITAP33076 1130 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 LIMK1P53667 647 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 SF3A2Q15428 464 aaKnown RBP10.34□□□□□ -0.75
COL17A1-207ENST00000488320 CCDC6Q16204 474 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 PSMD5Q16401 504 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 UVSSAQ2YD98 709 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 RTP2Q5QGT7 225 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 FAM171A1Q5VUB5 890 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 PLA2G4FQ68DD2 849 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 NOTUMQ6P988 496 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 SGMS1Q86VZ5 419 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 EXOC8Q8IYI6 725 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 FAM160A2Q8N612 972 aaPredicted RBP10.34□□□□□ -0.75
COL17A1-207ENST00000488320 RDM1Q8NG50 284 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 HASPINQ8TF76 798 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 PRPF31Q8WWY3 499 aaKnown RBP10.34□□□□□ -0.75
COL17A1-207ENST00000488320 PSPC1Q8WXF1 523 aaKnown RBP10.34□□□□□ -0.75
COL17A1-207ENST00000488320 SLC7A3Q8WY07 619 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 IRF7Q92985 503 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 COL26A1Q96A83 441 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 TMEM143Q96AN5 459 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 ELSPBP1Q96BH3 223 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 CPB2Q96IY4 423 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 CEP89Q96ST8 783 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 TRMT61BQ9BVS5 477 aaKnown RBP10.34□□□□□ -0.75
COL17A1-207ENST00000488320 PARP2Q9UGN5 583 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 ASPMQ8IZT6 3477 aa10.34□□□□□ -0.75
COL17A1-207ENST00000488320 CNOT1A5YKK6 2376 aaKnown RBP10.33□□□□□ -0.76
COL17A1-207ENST00000488320 GOLGA8AA7E2F4 631 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 SOBPA7XYQ1 873 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 GOLGA8BA8MQT2 603 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 ADAMTS3O15072 1205 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 ASAP2O43150 1006 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 STBD1O95210 358 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 IGHDP01880 384 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 PTPN2P17706 415 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 AKAP5P24588 427 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 AXLP30530 894 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 LAMTOR4Q0VGL1 99 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 FUT2Q10981 343 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 HSP90AA2PQ14568 343 aaPredicted RBP10.33□□□□□ -0.76
COL17A1-207ENST00000488320 TTC22Q5TAA0 569 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 STPG1Q5TH74 334 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 APOA5Q6Q788 366 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 RNF149Q8NC42 400 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 LNX1Q8TBB1 728 aaPredicted RBP10.33□□□□□ -0.76
COL17A1-207ENST00000488320 BICD2Q8TD16 824 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 SLC5A5Q92911 643 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 LENG9Q96B70 501 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 CEP170P1Q96L14 293 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 ZMYND12Q9H0C1 365 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 CSRNP2Q9H175 543 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 ZFP14Q9HCL3 533 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 BMP2KQ9NSY1 1161 aaPredicted RBP10.33□□□□□ -0.76
COL17A1-207ENST00000488320 KLK14Q9P0G3 267 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 PIAS3Q9Y6X2 628 aa10.33□□□□□ -0.76
COL17A1-207ENST00000488320 SHISA7A6NL88 538 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 TM4SF5O14894 197 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 SLC27A2O14975 620 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 RHOP08100 348 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 ZNF806P0C7X5 589 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 GSPT1P15170 499 aaKnown RBP10.32□□□□□ -0.76
COL17A1-207ENST00000488320 CCNE1P24864 410 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 GDI1P31150 447 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 OR1D2P34982 312 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 USP11P51784 963 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 NPEPPSP55786 919 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 PSMC5P62195 406 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 FOXC1Q12948 553 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 GRIK3Q13003 919 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 LRRC32Q14392 662 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 PFKFB3Q16875 520 aaPredicted RBP10.32□□□□□ -0.76
COL17A1-207ENST00000488320 PSAPL1Q6NUJ1 521 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 PDXDC1Q6P996 788 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 ANO5Q75V66 913 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 ZNF687Q8N1G0 1237 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 SPEM1Q8N4L4 309 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 TCP11Q8WWU5 503 aa10.32□□□□□ -0.76
COL17A1-207ENST00000488320 PIK3R5Q8WYR1 880 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms