RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 ASIC4Q96FT7 647 aa24.91■■□□□ 1.58
PTPN4-211ENST00000488279 TMX3Q96JJ7 454 aa24.91■■□□□ 1.58
PTPN4-211ENST00000488279 MAN1C1Q9NR34 630 aa24.91■■□□□ 1.58
PTPN4-211ENST00000488279 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.91■■□□□ 1.58
PTPN4-211ENST00000488279 LIMD1Q9UGP4 676 aa24.91■■□□□ 1.58
PTPN4-211ENST00000488279 SORCS3Q9UPU3 1222 aa24.91■■□□□ 1.58
PTPN4-211ENST00000488279 MUC6Q6W4X9 2439 aa24.9■■□□□ 1.58
PTPN4-211ENST00000488279 K7ERI5 159 aa24.9■■□□□ 1.58
PTPN4-211ENST00000488279 RECQL4O94761 1208 aa24.9■■□□□ 1.58
PTPN4-211ENST00000488279 IL17AQ16552 155 aa24.9■■□□□ 1.58
PTPN4-211ENST00000488279 DCAF4L1Q3SXM0 396 aa24.9■■□□□ 1.58
PTPN4-211ENST00000488279 RILPL1Q5EBL4 403 aa24.9■■□□□ 1.58
PTPN4-211ENST00000488279 CCDC149Q6ZUS6 474 aa24.9■■□□□ 1.58
PTPN4-211ENST00000488279 CMASQ8NFW8 434 aaPredicted RBP24.9■■□□□ 1.58
PTPN4-211ENST00000488279 ACSF2Q96CM8 615 aaPredicted RBP24.9■■□□□ 1.58
PTPN4-211ENST00000488279 B3GALT6Q96L58 329 aa24.9■■□□□ 1.58
PTPN4-211ENST00000488279 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.9■■□□□ 1.58
PTPN4-211ENST00000488279 PP2D1A8MPX8 630 aa24.89■■□□□ 1.58
PTPN4-211ENST00000488279 E9PMD0 336 aa24.89■■□□□ 1.58
PTPN4-211ENST00000488279 H3BQV1 296 aa24.89■■□□□ 1.58
PTPN4-211ENST00000488279 C1RP00736 705 aa24.89■■□□□ 1.58
PTPN4-211ENST00000488279 NT5DC1Q5TFE4 455 aa24.89■■□□□ 1.58
PTPN4-211ENST00000488279 OTOP3Q7RTS5 596 aa24.89■■□□□ 1.58
PTPN4-211ENST00000488279 APBB1IPQ7Z5R6 666 aaPredicted RBP24.89■■□□□ 1.58
PTPN4-211ENST00000488279 FEZF2Q8TBJ5 459 aa24.89■■□□□ 1.58
PTPN4-211ENST00000488279 RIN2Q8WYP3 895 aaPredicted RBP24.89■■□□□ 1.58
PTPN4-211ENST00000488279 SF3B1O75533 1304 aaKnown RBP eCLIP24.88■■□□□ 1.579e-6■■■■■ 68.9
PTPN4-211ENST00000488279 CCDC195A0A1B0GUA6 201 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 CASTOR2A6NHX0 329 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 CCDC169A6NNP5 214 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 PTGESO14684 152 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 EDN1P05305 212 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 CDC25AP30304 524 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 MCM2P49736 904 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 CREMQ03060 361 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 ATF7IP2Q5U623 682 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 EEF1DP3Q658K8 133 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 CYP26C1Q6V0L0 522 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 PALB2Q86YC2 1186 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 HDAC7Q8WUI4 952 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 PAAF1Q9BRP4 392 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 FNIP2Q9P278 1114 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 CACNG4Q9UBN1 327 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 GDAQ9Y2T3 454 aa24.88■■□□□ 1.57
PTPN4-211ENST00000488279 BRD1O95696 1058 aa24.87■■□□□ 1.57
PTPN4-211ENST00000488279 ASGR2P07307 311 aa24.87■■□□□ 1.57
PTPN4-211ENST00000488279 GJB2P29033 226 aa24.87■■□□□ 1.57
PTPN4-211ENST00000488279 NPTX2P47972 431 aa24.87■■□□□ 1.57
PTPN4-211ENST00000488279 PEX3P56589 373 aa24.87■■□□□ 1.57
PTPN4-211ENST00000488279 PLEKHA4Q9H4M7 779 aa24.87■■□□□ 1.57
PTPN4-211ENST00000488279 SPATA31D3P0C874 917 aa24.86■■□□□ 1.57
PTPN4-211ENST00000488279 MYBP10242 640 aa24.86■■□□□ 1.57
PTPN4-211ENST00000488279 DMP1Q13316 513 aaPredicted RBP24.86■■□□□ 1.57
PTPN4-211ENST00000488279 ZRSR1Q15695 479 aaKnown RBP24.86■■□□□ 1.57
PTPN4-211ENST00000488279 RINT1Q6NUQ1 792 aa24.86■■□□□ 1.57
PTPN4-211ENST00000488279 SPATA31D4Q6ZUB0 917 aa24.86■■□□□ 1.57
PTPN4-211ENST00000488279 DRC1Q96MC2 740 aa24.86■■□□□ 1.57
PTPN4-211ENST00000488279 PRRX2Q99811 253 aa24.86■■□□□ 1.57
PTPN4-211ENST00000488279 MMTAG2Q9BU76 263 aaKnown RBP24.86■■□□□ 1.57
PTPN4-211ENST00000488279 RHOBTB2Q9BYZ6 727 aa24.86■■□□□ 1.57
PTPN4-211ENST00000488279 TNFSF13BQ9Y275 285 aa24.86■■□□□ 1.57
PTPN4-211ENST00000488279 TGM5O43548 720 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 HIP1RO75146 1068 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 ATP2C1P98194 919 aaPredicted RBP24.85■■□□□ 1.57
PTPN4-211ENST00000488279 NHLH1Q02575 133 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 IER5LQ5T953 404 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 FAM171A1Q5VUB5 890 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 C1orf186Q6ZWK4 172 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 HASPINQ8TF76 798 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 TTPALQ9BTX7 342 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 RUSC1Q9BVN2 902 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 CXCL16Q9H2A7 254 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 TMEM134Q9H6X4 195 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 C17orf75Q9HAS0 396 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 RBM19Q9Y4C8 960 aaKnown RBP24.85■■□□□ 1.57
PTPN4-211ENST00000488279 PHLPP2Q6ZVD8 1323 aa24.85■■□□□ 1.57
PTPN4-211ENST00000488279 TDRD15B5MCY1 1934 aaKnown RBP24.84■■□□□ 1.57
PTPN4-211ENST00000488279 RFPL2O75678 378 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 KIF4AO95239 1232 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 CD2BP2O95400 341 aaKnown RBP24.84■■□□□ 1.57
PTPN4-211ENST00000488279 ELAVL2Q12926 359 aaKnown RBP24.84■■□□□ 1.57
PTPN4-211ENST00000488279 NAB2Q15742 525 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 RTP2Q5QGT7 225 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 LILRA6Q6PI73 481 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 CEP57Q86XR8 500 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 GLYCTKQ8IVS8 523 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 DAW1Q8N136 415 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 TIPINQ9BVW5 301 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 WDR6Q9NNW5 1121 aaKnown RBP24.84■■□□□ 1.57
PTPN4-211ENST00000488279 KMT5AQ9NQR1 393 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 SMC3Q9UQE7 1217 aa24.84■■□□□ 1.57
PTPN4-211ENST00000488279 RPL17P18621 184 aaKnown RBP24.83■■□□□ 1.57
PTPN4-211ENST00000488279 PRSS55Q6UWB4 352 aaPredicted RBP24.83■■□□□ 1.57
PTPN4-211ENST00000488279 KCNK18Q7Z418 384 aa24.83■■□□□ 1.57
PTPN4-211ENST00000488279 KCTD17Q8N5Z5 321 aa24.83■■□□□ 1.57
PTPN4-211ENST00000488279 SMG7Q92540 1137 aaKnown RBP24.83■■□□□ 1.57
PTPN4-211ENST00000488279 STAMQ92783 540 aa24.83■■□□□ 1.57
PTPN4-211ENST00000488279 ACO2Q99798 780 aaKnown RBP24.83■■□□□ 1.57
PTPN4-211ENST00000488279 MRPL4Q9BYD3 311 aaKnown RBP24.83■■□□□ 1.57
PTPN4-211ENST00000488279 ZDHHC7Q9NXF8 308 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms