RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 POTEGQ6S5H5 508 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 C4orf32Q8N8J7 132 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 BSNDQ8WZ55 320 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 SMG7Q92540 1137 aaKnown RBP16.92■□□□□ 0.3
TRIM50-203ENST00000488217 ZNF707Q96C28 371 aaPredicted RBP16.92■□□□□ 0.3
TRIM50-203ENST00000488217 ZSCAN31Q96LW9 406 aaPredicted RBP16.92■□□□□ 0.3
TRIM50-203ENST00000488217 PAAF1Q9BRP4 392 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 PIDD1Q9HB75 910 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 POLD4Q9HCU8 107 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 FAM86C1Q9NVL1 165 aa16.92■□□□□ 0.3
TRIM50-203ENST00000488217 DAXXQ9UER7 740 aaPredicted RBP16.92■□□□□ 0.3
TRIM50-203ENST00000488217 ZNF318Q5VUA4 2279 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 ZMYM2Q9UBW7 1377 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 N4BP1O75113 896 aaKnown RBP16.91■□□□□ 0.3
TRIM50-203ENST00000488217 THP07101 528 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 GBP2P32456 591 aaPredicted RBP16.91■□□□□ 0.3
TRIM50-203ENST00000488217 NAMPTP43490 491 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 CREMQ03060 361 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 TTC38Q5R3I4 469 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 NOSTRINQ8IVI9 506 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 DEPTORQ8TB45 409 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 PRKD2Q9BZL6 878 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 PDZD7Q9H5P4 517 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 ZDHHC7Q9NXF8 308 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.91■□□□□ 0.3
TRIM50-203ENST00000488217 USP20Q9Y2K6 914 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 USP34Q70CQ2 3546 aa16.91■□□□□ 0.3
TRIM50-203ENST00000488217 ST18O60284 1047 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 PRKCBP05771 671 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 NPR3P17342 541 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 RPL17P18621 184 aaKnown RBP16.9■□□□□ 0.3
TRIM50-203ENST00000488217 LIG1P18858 919 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 CCT6AP40227 531 aaKnown RBP16.9■□□□□ 0.3
TRIM50-203ENST00000488217 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRIM50-203ENST00000488217 EFNA5P52803 228 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 HMGN5P82970 282 aaKnown RBP16.9■□□□□ 0.3
TRIM50-203ENST00000488217 GNL2Q13823 731 aaKnown RBP16.9■□□□□ 0.3
TRIM50-203ENST00000488217 ECM1Q16610 540 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 FAM171A1Q5VUB5 890 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 GLYCTKQ8IVS8 523 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 SLC44A3Q8N4M1 653 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 FAM184AQ8NB25 1140 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 FLCNQ8NFG4 579 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 RSAD2Q8WXG1 361 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 NXPE3Q969Y0 559 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 IFT74Q96LB3 600 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 ADPGKQ9BRR6 497 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 TTPALQ9BTX7 342 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 CCDC113Q9H0I3 377 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 CXCL16Q9H2A7 254 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 EPS15L1Q9UBC2 864 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 CACNG4Q9UBN1 327 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 LRWD1Q9UFC0 647 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 DUSP12Q9UNI6 340 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 KIAA1024Q9UPX6 916 aa16.9■□□□□ 0.3
TRIM50-203ENST00000488217 CASTOR2A6NHX0 329 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 PTGESO14684 152 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 RTP2Q5QGT7 225 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 HAUS3Q68CZ6 603 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 PRSS55Q6UWB4 352 aaPredicted RBP16.89■□□□□ 0.29
TRIM50-203ENST00000488217 CEP57Q86XR8 500 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 LNX1Q8TBB1 728 aaPredicted RBP16.89■□□□□ 0.29
TRIM50-203ENST00000488217 KIFAP3Q92845 792 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 MYADMQ96S97 322 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 CLSTN3Q9BQT9 956 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 BHMT2Q9H2M3 363 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 WNT16Q9UBV4 365 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 FBXL21Q9UKT6 434 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 NOL7Q9UMY1 257 aaKnown RBP16.89■□□□□ 0.29
TRIM50-203ENST00000488217 STK24Q9Y6E0 443 aa16.89■□□□□ 0.29
TRIM50-203ENST00000488217 SF3B1O75533 1304 aaKnown RBP eCLIP16.89■□□□□ 0.29
TRIM50-203ENST00000488217 K7ERI5 159 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 PI15O43692 258 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 GFRA3O60609 400 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 ZMYND10O75800 440 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 RECQL4O94761 1208 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 LAMP2P13473 410 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 ELAVL2Q12926 359 aaKnown RBP16.88■□□□□ 0.29
TRIM50-203ENST00000488217 NAB2Q15742 525 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 NT5DC1Q5TFE4 455 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 EEF1DP3Q658K8 133 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 DCLRE1AQ6PJP8 1040 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 SH2B1Q9NRF2 756 aaPredicted RBP16.88■□□□□ 0.29
TRIM50-203ENST00000488217 GDAQ9Y2T3 454 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 ZDBF2Q9HCK1 2354 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 CLUHO75153 1309 aa16.88■□□□□ 0.29
TRIM50-203ENST00000488217 PROB1E7EW31 1015 aa16.87■□□□□ 0.29
TRIM50-203ENST00000488217 NARSO43776 548 aaKnown RBP16.87■□□□□ 0.29
TRIM50-203ENST00000488217 AOC1P19801 751 aa16.87■□□□□ 0.29
TRIM50-203ENST00000488217 U2AF2P26368 475 aaKnown RBP eCLIP16.87■□□□□ 0.29
TRIM50-203ENST00000488217 TOB1P50616 345 aaPredicted RBP16.87■□□□□ 0.29
TRIM50-203ENST00000488217 PTGDRQ13258 359 aa16.87■□□□□ 0.29
TRIM50-203ENST00000488217 DCAF4L1Q3SXM0 396 aa16.87■□□□□ 0.29
TRIM50-203ENST00000488217 PDXDC1Q6P996 788 aa16.87■□□□□ 0.29
TRIM50-203ENST00000488217 SIX5Q8N196 739 aa16.87■□□□□ 0.29
TRIM50-203ENST00000488217 HASPINQ8TF76 798 aa16.87■□□□□ 0.29
TRIM50-203ENST00000488217 PIK3R5Q8WYR1 880 aa16.87■□□□□ 0.29
TRIM50-203ENST00000488217 RTP3Q9BQQ7 232 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms