RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 KLHL33A6NCF5 533 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 LPXNO60711 386 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 PCDH8O95206 1070 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 MT-CO1P00395 513 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 ERBB2P04626 1255 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 JUNP05412 331 aaKnown RBP4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 U2AF1L5P0DN76 240 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 ZFP36P26651 326 aaKnown RBP4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 CLK3P49761 638 aaKnown RBP4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 NPEPPSP55786 919 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 ERVK-21P61565 698 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 KRT85P78386 507 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 MRPS9P82933 396 aaKnown RBP4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 U2AF1Q01081 240 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 PPARAQ07869 468 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 FAM214AQ32MH5 1076 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 LMBR1LQ6UX01 489 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 STAG1Q8WVM7 1258 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 LMBR1Q8WVP7 490 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 AUTS2Q8WXX7 1259 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 SLC13A1Q9BZW2 595 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 CCM2LQ9NUG4 571 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 SAP30BPQ9UHR5 308 aaKnown RBP4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 PCDHB6Q9Y5E3 794 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 PPP2R3BQ9Y5P8 575 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 SPATA31A6Q5VVP1 1343 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 MYPNQ86TC9 1320 aa4.95□□□□□ -1.62
HMGB1P36-201ENST00000487709 CENPVL1A0A0U1RR11 272 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 TRIM75PA6NK02 468 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 GABRDO14764 452 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 DAPK3O43293 454 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 RECQL4O94761 1208 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 HNRNPLP14866 589 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 GYPEP15421 78 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 LAG3P18627 525 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 IARSP41252 1262 aaKnown RBP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 RECQLP46063 649 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 PIN1Q13526 163 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 MYBPC3Q14896 1274 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 DCAF17Q5H9S7 520 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 EFCAB2Q5VUJ9 269 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 NAIF1Q69YI7 327 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 Q6YL49 198 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 KANSL1Q7Z3B3 1105 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 FUBP3Q96I24 572 aaKnown RBP eCLIP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 QRSL1Q9H0R6 528 aaKnown RBP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 CCDC8Q9H0W5 538 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 R3HDMLQ9H3Y0 253 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 RSAD1Q9HA92 442 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 ANKFY1Q9P2R3 1169 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 EIF2B4Q9UI10 523 aaKnown RBP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 USP18Q9UMW8 372 aa4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 G3BP2Q9UN86 482 aaKnown RBP4.94□□□□□ -1.62
HMGB1P36-201ENST00000487709 TRIM24O15164 1050 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 OPHN1O60890 802 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 FSBPO95073 299 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 PFKMP08237 780 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 CLEC2LP0C7M8 214 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 RBP3P10745 1247 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 CDK4P11802 303 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 PTTG1IPP53801 180 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 SLC16A1P53985 500 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 PPP2R5AQ15172 486 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 HSP90AB2PQ58FF8 381 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 CMTM4Q8IZR5 234 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 SUPT20HQ8NEM7 779 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 C1orf162Q8NEQ5 155 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 TGFBRAP1Q8WUH2 860 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 GAB3Q8WWW8 586 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 PITHD1Q9GZP4 211 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 EPC1Q9H2F5 836 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 MS4A5Q9H3V2 200 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 C14orf93Q9H972 538 aaKnown RBP4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 VTA1Q9NP79 307 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 KLHL42Q9P2K6 505 aa4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 LUC7L2Q9Y383 392 aaKnown RBP4.93□□□□□ -1.62
HMGB1P36-201ENST00000487709 COL4A3Q01955 1670 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 A0A0A6YYJ9 748 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 PRSS38A1L453 326 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 DTNBO60941 627 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 ZEB1P37275 1124 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 USP14P54578 494 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 LGALS4P56470 323 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 FAM189BP81408 668 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 PDCD1Q15116 288 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 ANO4Q32M45 955 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 CT83Q5H943 113 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 TOR2AQ5JU69 321 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 ZBTB41Q5SVQ8 909 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 EAF2Q96CJ1 260 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 FAXDC2Q96IV6 333 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 ACE2Q9BYF1 805 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 WDR11Q9BZH6 1224 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 KCTD10Q9H3F6 313 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 PRDM13Q9H4Q3 707 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 EDARQ9UNE0 448 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 GPR45Q9Y5Y3 372 aa4.92□□□□□ -1.62
HMGB1P36-201ENST00000487709 LCHNA4D1U4 455 aa4.91□□□□□ -1.62
HMGB1P36-201ENST00000487709 KRTAP29-1A8MX34 341 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms