RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 BCAS3Q9H6U6 928 aa7.36□□□□□ -1.23
SEC22C-215ENST00000487701 VPS54Q9P1Q0 977 aa7.36□□□□□ -1.23
SEC22C-215ENST00000487701 PCDHA6Q9UN73 950 aa7.36□□□□□ -1.23
SEC22C-215ENST00000487701 PCDHA8Q9Y5H6 950 aa7.36□□□□□ -1.23
SEC22C-215ENST00000487701 MRVI1Q9Y6F6 885 aa7.36□□□□□ -1.23
SEC22C-215ENST00000487701 GBF1Q92538 1859 aa7.36□□□□□ -1.23
SEC22C-215ENST00000487701 LAMA2P24043 3122 aaKnown RBP7.36□□□□□ -1.23
SEC22C-215ENST00000487701 GRIN2DO15399 1336 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 STK36Q9NRP7 1315 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 CPLX1O14810 134 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 SORBS3O60504 671 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 GH1P01241 217 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 PRNPP04156 253 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 MMP3P08254 477 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 ITGB5P18084 799 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 NTF4P34130 210 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 PURAQ00577 322 aaKnown RBP7.35□□□□□ -1.23
SEC22C-215ENST00000487701 AKAP17AQ02040 695 aaKnown RBP7.35□□□□□ -1.23
SEC22C-215ENST00000487701 SSRP1Q08945 709 aaKnown RBP7.35□□□□□ -1.23
SEC22C-215ENST00000487701 NPY5RQ15761 445 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 JAKMIP3Q5VZ66 844 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 KCT2Q8NC54 265 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 NSUN7Q8NE18 718 aaKnown RBP7.35□□□□□ -1.23
SEC22C-215ENST00000487701 CYP2W1Q8TAV3 490 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 ZNF507Q8TCN5 953 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 RASGRP4Q8TDF6 673 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 AFG1LQ8WV93 481 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 CRYGNQ8WXF5 182 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 FBXL18Q96ME1 805 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 ANO3Q9BYT9 981 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 BACH2Q9BYV9 841 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 SPC25Q9HBM1 224 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 STARD7Q9NQZ5 370 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 RTEL1Q9NZ71 1219 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 VTI1BQ9UEU0 232 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 ZMYND8Q9ULU4 1186 aaPredicted RBP7.35□□□□□ -1.23
SEC22C-215ENST00000487701 ATP11BQ9Y2G3 1177 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 TELO2Q9Y4R8 837 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 PCDHB5Q9Y5E4 795 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 PTPRSQ13332 1948 aa7.35□□□□□ -1.23
SEC22C-215ENST00000487701 SZT2Q5T011 3432 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 ELP1O95163 1332 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 EDIL3O43854 480 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 JAK2O60674 1132 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 PQBP1O60828 265 aaKnown RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 STAM2O75886 525 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 DEXIO95424 95 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 GGPS1O95749 300 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 MYL3P08590 195 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 FDPSP14324 419 aaKnown RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 SYN1P17600 705 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 ICAM3P32942 547 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 SREBF1P36956 1147 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 CPT1AP50416 773 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 CDK7P50613 346 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 PSMC6P62333 389 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 ETF1P62495 437 aaKnown RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 RPS26P62854 115 aaKnown RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 TAGLNQ01995 201 aaKnown RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 TLE2Q04725 743 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 CELF3Q5SZQ8 465 aaKnown RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 XRRA1Q6P2D8 792 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 CPLX2Q6PUV4 134 aaKnown RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 TEX2Q8IWB9 1127 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 ABI1Q8IZP0 508 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 REXO1Q8N1G1 1221 aaKnown RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 PLD6Q8N2A8 252 aaKnown RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 CCDC12Q8WUD4 166 aaPredicted RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 PPP1R13LQ8WUF5 828 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 GLT8D2Q9H1C3 349 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 MIR1-1HGQ9H1L0 117 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 PDLIM7Q9NR12 457 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 SH3GLB2Q9NR46 395 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 GJB4Q9NTQ9 266 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 ORC3Q9UBD5 711 aaPredicted RBP7.34□□□□□ -1.23
SEC22C-215ENST00000487701 UBIAD1Q9Y5Z9 338 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 MYH15Q9Y2K3 1946 aa7.34□□□□□ -1.23
SEC22C-215ENST00000487701 ARID2Q68CP9 1835 aa7.34□□□□□ -1.24
SEC22C-215ENST00000487701 A0A0U1RQG5 324 aaPredicted RBP7.33□□□□□ -1.24
SEC22C-215ENST00000487701 ARVCFO00192 962 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 PAX4O43316 350 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 FIBPO43427 364 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 ZEB2O60315 1214 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 ATP9AO75110 1047 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 CDKL5O76039 1030 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 FOSP01100 380 aaPredicted RBP7.33□□□□□ -1.24
SEC22C-215ENST00000487701 ZNF286BP0CG31 522 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 TGFB3P10600 412 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 KCNA2P16389 499 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 ITIH2P19823 946 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 ITGB8P26012 769 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 GNA11P29992 359 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 RING1Q06587 406 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 RABEP1Q15276 862 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 HSDL1Q3SXM5 330 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 GNPTABQ3T906 1256 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 KCNV1Q6PIU1 500 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 ARMCX6Q7L4S7 300 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 ANKRD33Q7Z3H0 272 aa7.33□□□□□ -1.24
SEC22C-215ENST00000487701 CCDC83Q8IWF9 413 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms