RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 ZNF568Q3ZCX4 644 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 USP49Q70CQ1 688 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 RABGGTAQ92696 567 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 CLIC6Q96NY7 704 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 REEP2Q9BRK0 252 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 HERC2P3Q9BVR0 1158 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 CDT1Q9H211 546 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 MRPL17Q9NRX2 175 aaKnown RBP22.44■■□□□ 1.18
HDAC4-209ENST00000487617 LARSQ9P2J5 1176 aaKnown RBP22.44■■□□□ 1.18
HDAC4-209ENST00000487617 ODF2LQ9ULJ1 636 aa22.44■■□□□ 1.18
HDAC4-209ENST00000487617 KRT18P05783 430 aaKnown RBP22.43■■□□□ 1.18
HDAC4-209ENST00000487617 URODP06132 367 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 HOXB8P17481 243 aaPredicted RBP22.43■■□□□ 1.18
HDAC4-209ENST00000487617 TUSC3Q13454 348 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 SYCE2Q6PIF2 218 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 TAS1R1Q7RTX1 841 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 ZBTB33Q86T24 672 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 TMEM161BQ8NDZ6 487 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 LARP4BQ92615 738 aaKnown RBP22.43■■□□□ 1.18
HDAC4-209ENST00000487617 POP1Q99575 1024 aaKnown RBP22.43■■□□□ 1.18
HDAC4-209ENST00000487617 TCHPQ9BT92 498 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 APOL5Q9BWW9 433 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 EMILIN2Q9BXX0 1053 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 CXCL16Q9H2A7 254 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 PTPRHQ9HD43 1115 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 CACNG4Q9UBN1 327 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 CCDC39Q9UFE4 941 aa22.43■■□□□ 1.18
HDAC4-209ENST00000487617 CASTOR2A6NHX0 329 aa22.42■■□□□ 1.18
HDAC4-209ENST00000487617 C2CD2LO14523 706 aa22.42■■□□□ 1.18
HDAC4-209ENST00000487617 FAM13AO94988 1023 aa22.42■■□□□ 1.18
HDAC4-209ENST00000487617 MAPTP10636 758 aaKnown RBP22.42■■□□□ 1.18
HDAC4-209ENST00000487617 TXLNAP40222 546 aa22.42■■□□□ 1.18
HDAC4-209ENST00000487617 SLC39A14Q15043 492 aa22.42■■□□□ 1.18
HDAC4-209ENST00000487617 CCDC94Q9BW85 323 aaPredicted RBP22.42■■□□□ 1.18
HDAC4-209ENST00000487617 S1PR5Q9H228 398 aa22.42■■□□□ 1.18
HDAC4-209ENST00000487617 C19orf67A6NJJ6 358 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 H0YCG3 227 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 LILRB3O75022 631 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 TADA2AO75478 443 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 CNPP09543 421 aaKnown RBP22.41■■□□□ 1.18
HDAC4-209ENST00000487617 MCF2P10911 925 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 KLRC2P26717 231 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 DDIT3P35638 169 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 GRM5P41594 1212 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 YARSP54577 528 aaKnown RBP22.41■■□□□ 1.18
HDAC4-209ENST00000487617 OSTNP61366 133 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 HSP90AA2PQ14568 343 aaPredicted RBP22.41■■□□□ 1.18
HDAC4-209ENST00000487617 TPRNQ4KMQ1 711 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 FOXD4L5Q5VV16 416 aaPredicted RBP22.41■■□□□ 1.18
HDAC4-209ENST00000487617 KIAA1841Q6NSI8 718 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 FUT10Q6P4F1 479 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 MPZL3Q6UWV2 235 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 PPFIBP1Q86W92 1011 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 RNF168Q8IYW5 571 aaPredicted RBP22.41■■□□□ 1.18
HDAC4-209ENST00000487617 MYCT1Q8N699 235 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 CEP120Q8N960 986 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 FOXD4L4Q8WXT5 416 aaPredicted RBP22.41■■□□□ 1.18
HDAC4-209ENST00000487617 KHSRPQ92945 711 aaKnown RBP eCLIP22.41■■□□□ 1.18
HDAC4-209ENST00000487617 KLHL5Q96PQ7 755 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 PAAF1Q9BRP4 392 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 ZHX3Q9H4I2 956 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 PARVGQ9HBI0 331 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 ADAM28Q9UKQ2 775 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 SSX2IPQ9Y2D8 614 aa22.41■■□□□ 1.18
HDAC4-209ENST00000487617 MORC2Q9Y6X9 1032 aaPredicted RBP22.41■■□□□ 1.18
HDAC4-209ENST00000487617 EFEMP2O95967 443 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 HARSP12081 509 aaKnown RBP22.4■■□□□ 1.18
HDAC4-209ENST00000487617 EPCAMP16422 314 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 PROZP22891 400 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 NASPP49321 788 aaPredicted RBP22.4■■□□□ 1.18
HDAC4-209ENST00000487617 GLUD2P49448 558 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 NCKAP1LP55160 1127 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 STK38Q15208 465 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 GLRA4Q5JXX5 417 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 RRAGBQ5VZM2 374 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 KRI1Q8N9T8 703 aaKnown RBP22.4■■□□□ 1.18
HDAC4-209ENST00000487617 SLC22A17Q8WUG5 538 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 SUSD6Q92537 303 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 ZBTB45Q96K62 511 aaPredicted RBP22.4■■□□□ 1.18
HDAC4-209ENST00000487617 ZNF396Q96N95 335 aaPredicted RBP22.4■■□□□ 1.18
HDAC4-209ENST00000487617 GPR62Q9BZJ7 368 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 EPHX3Q9H6B9 360 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 STK17AQ9UEE5 414 aa22.4■■□□□ 1.18
HDAC4-209ENST00000487617 ABLIM1O14639 778 aa22.39■■□□□ 1.17
HDAC4-209ENST00000487617 TBCAO75347 108 aaKnown RBP22.39■■□□□ 1.17
HDAC4-209ENST00000487617 TOM1L1O75674 476 aa22.39■■□□□ 1.17
HDAC4-209ENST00000487617 NAB2Q15742 525 aa22.39■■□□□ 1.17
HDAC4-209ENST00000487617 HAUS6Q7Z4H7 955 aa22.39■■□□□ 1.17
HDAC4-209ENST00000487617 SPRYD3Q8NCJ5 442 aa22.39■■□□□ 1.17
HDAC4-209ENST00000487617 BICD1Q96G01 975 aa22.39■■□□□ 1.17
HDAC4-209ENST00000487617 TOPORSQ9NS56 1045 aaPredicted RBP22.39■■□□□ 1.17
HDAC4-209ENST00000487617 DZANK1Q9NVP4 752 aa22.39■■□□□ 1.17
HDAC4-209ENST00000487617 ANKFY1Q9P2R3 1169 aa22.39■■□□□ 1.17
HDAC4-209ENST00000487617 TFIP11Q9UBB9 837 aaKnown RBP22.39■■□□□ 1.17
HDAC4-209ENST00000487617 TDRD15B5MCY1 1934 aaKnown RBP22.39■■□□□ 1.17
HDAC4-209ENST00000487617 MUC3AQ02505 3323 aa22.38■■□□□ 1.17
HDAC4-209ENST00000487617 K7ENM7 598 aa22.38■■□□□ 1.17
HDAC4-209ENST00000487617 BRD1O95696 1058 aa22.38■■□□□ 1.17
HDAC4-209ENST00000487617 PDIA4P13667 645 aaKnown RBP22.38■■□□□ 1.17
HDAC4-209ENST00000487617 ZNF131P52739 623 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms