RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 GDAQ9Y2T3 454 aa25.99■■□□□ 1.75
PLOD3-215ENST00000487563 SF3B1O75533 1304 aaKnown RBP eCLIP25.98■■□□□ 1.758e-6■■■■■ 107
PLOD3-215ENST00000487563 CASTOR2A6NHX0 329 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 EFEMP2O95967 443 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 EDN1P05305 212 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 THP07101 528 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 CDC25AP30304 524 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 MCM2P49736 904 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 ATF7IP2Q5U623 682 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 RIN2Q8WYP3 895 aaPredicted RBP25.98■■□□□ 1.75
PLOD3-215ENST00000487563 GPR62Q9BZJ7 368 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 RXFP1Q9HBX9 757 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.98■■□□□ 1.75
PLOD3-215ENST00000487563 CACNG4Q9UBN1 327 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 SORCS3Q9UPU3 1222 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 SMC3Q9UQE7 1217 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 USTQ9Y2C2 406 aa25.98■■□□□ 1.75
PLOD3-215ENST00000487563 K7ERI5 159 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 CD2BP2O95400 341 aaKnown RBP25.97■■□□□ 1.75
PLOD3-215ENST00000487563 PEX3P56589 373 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 CREMQ03060 361 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 DMP1Q13316 513 aaPredicted RBP25.97■■□□□ 1.75
PLOD3-215ENST00000487563 MTMR3Q13615 1198 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 IL17AQ16552 155 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 PLCD3Q8N3E9 789 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 HASPINQ8TF76 798 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 ACSF2Q96CM8 615 aaPredicted RBP25.97■■□□□ 1.75
PLOD3-215ENST00000487563 DRC1Q96MC2 740 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 CHST7Q9NS84 486 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 MUC6Q6W4X9 2439 aa25.97■■□□□ 1.75
PLOD3-215ENST00000487563 PHLPP2Q6ZVD8 1323 aa25.96■■□□□ 1.75
PLOD3-215ENST00000487563 PTGESO14684 152 aa25.96■■□□□ 1.75
PLOD3-215ENST00000487563 HIP1RO75146 1068 aa25.96■■□□□ 1.75
PLOD3-215ENST00000487563 MYBP10242 640 aa25.96■■□□□ 1.75
PLOD3-215ENST00000487563 ATP2C1P98194 919 aaPredicted RBP25.96■■□□□ 1.75
PLOD3-215ENST00000487563 C15orf39Q6ZRI6 1047 aa25.96■■□□□ 1.75
PLOD3-215ENST00000487563 GLYCTKQ8IVS8 523 aa25.96■■□□□ 1.75
PLOD3-215ENST00000487563 ZDHHC14Q8IZN3 488 aa25.96■■□□□ 1.75
PLOD3-215ENST00000487563 FBXL6Q8N531 539 aa25.96■■□□□ 1.75
PLOD3-215ENST00000487563 PAAF1Q9BRP4 392 aa25.96■■□□□ 1.75
PLOD3-215ENST00000487563 DAXXQ9UER7 740 aaPredicted RBP25.96■■□□□ 1.75
PLOD3-215ENST00000487563 TRIOO75962 3097 aa25.95■■□□□ 1.75
PLOD3-215ENST00000487563 NPTX2P47972 431 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 NT5DC1Q5TFE4 455 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 OTOP3Q7RTS5 596 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 PALB2Q86YC2 1186 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 UBALD2Q8IYN6 164 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 CMASQ8NFW8 434 aaPredicted RBP25.95■■□□□ 1.74
PLOD3-215ENST00000487563 FEZF2Q8TBJ5 459 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 CDK5RAP3Q96JB5 506 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 RUSC1Q9BVN2 902 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 KMT5AQ9NQR1 393 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 LIMD1Q9UGP4 676 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 PLXNA3P51805 1871 aa25.95■■□□□ 1.74
PLOD3-215ENST00000487563 DENND4AQ7Z401 1863 aa25.94■■□□□ 1.74
PLOD3-215ENST00000487563 KIF4AO95239 1232 aa25.94■■□□□ 1.74
PLOD3-215ENST00000487563 ASGR2P07307 311 aa25.94■■□□□ 1.74
PLOD3-215ENST00000487563 GPR65Q8IYL9 337 aa25.94■■□□□ 1.74
PLOD3-215ENST00000487563 ASIC4Q96FT7 647 aa25.94■■□□□ 1.74
PLOD3-215ENST00000487563 MMTAG2Q9BU76 263 aaKnown RBP25.94■■□□□ 1.74
PLOD3-215ENST00000487563 FNIP2Q9P278 1114 aa25.94■■□□□ 1.74
PLOD3-215ENST00000487563 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.94■■□□□ 1.74
PLOD3-215ENST00000487563 ZNF318Q5VUA4 2279 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 CCDC195A0A1B0GUA6 201 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 VWA3AA6NCI4 1184 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 SPATA31D3P0C874 917 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 ZNF568Q3ZCX4 644 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 RINT1Q6NUQ1 792 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 SPATA31D4Q6ZUB0 917 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 KCNK18Q7Z418 384 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 DAW1Q8N136 415 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 MRPL4Q9BYD3 311 aaKnown RBP25.93■■□□□ 1.74
PLOD3-215ENST00000487563 NT5C3AQ9H0P0 336 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 TNFSF13BQ9Y275 285 aa25.93■■□□□ 1.74
PLOD3-215ENST00000487563 RPL17P18621 184 aaKnown RBP25.92■■□□□ 1.74
PLOD3-215ENST00000487563 YARSP54577 528 aaKnown RBP25.92■■□□□ 1.74
PLOD3-215ENST00000487563 ELAVL2Q12926 359 aaKnown RBP25.92■■□□□ 1.74
PLOD3-215ENST00000487563 GLRA4Q5JXX5 417 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 FAM171A1Q5VUB5 890 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 PRSS55Q6UWB4 352 aaPredicted RBP25.92■■□□□ 1.74
PLOD3-215ENST00000487563 CEP57Q86XR8 500 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 HDAC7Q8WUI4 952 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 TBC1D32Q96NH3 1257 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 TTPALQ9BTX7 342 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 TIPINQ9BVW5 301 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 CCDC94Q9BW85 323 aaPredicted RBP25.92■■□□□ 1.74
PLOD3-215ENST00000487563 CXCL16Q9H2A7 254 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 PLEKHA4Q9H4M7 779 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 TMEM134Q9H6X4 195 aa25.92■■□□□ 1.74
PLOD3-215ENST00000487563 RBM19Q9Y4C8 960 aaKnown RBP25.92■■□□□ 1.74
PLOD3-215ENST00000487563 C2orf16Q68DN1 1984 aa25.91■■□□□ 1.74
PLOD3-215ENST00000487563 TGM5O43548 720 aa25.91■■□□□ 1.74
PLOD3-215ENST00000487563 RFPL2O75678 378 aa25.91■■□□□ 1.74
PLOD3-215ENST00000487563 BRD1O95696 1058 aa25.91■■□□□ 1.74
PLOD3-215ENST00000487563 RTP2Q5QGT7 225 aa25.91■■□□□ 1.74
PLOD3-215ENST00000487563 LARP1BQ659C4 914 aaKnown RBP25.91■■□□□ 1.74
PLOD3-215ENST00000487563 CYP26C1Q6V0L0 522 aa25.91■■□□□ 1.74
PLOD3-215ENST00000487563 C1orf186Q6ZWK4 172 aa25.91■■□□□ 1.74
PLOD3-215ENST00000487563 SMG7Q92540 1137 aaKnown RBP25.91■■□□□ 1.74
PLOD3-215ENST00000487563 STAMQ92783 540 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms