RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 MUTP22033 750 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 CCT6AP40227 531 aaKnown RBP13.47□□□□□ -0.25
VPS16-208ENST00000487461 NAMPTP43490 491 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 TRAPPC10P48553 1259 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 TOB1P50616 345 aaPredicted RBP13.47□□□□□ -0.25
VPS16-208ENST00000487461 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
VPS16-208ENST00000487461 HMGN5P82970 282 aaKnown RBP13.47□□□□□ -0.25
VPS16-208ENST00000487461 HSP90AA2PQ14568 343 aaPredicted RBP13.47□□□□□ -0.25
VPS16-208ENST00000487461 MAPK6Q16659 721 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 EEF1DP3Q658K8 133 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 PRSS55Q6UWB4 352 aaPredicted RBP13.47□□□□□ -0.25
VPS16-208ENST00000487461 CYP26C1Q6V0L0 522 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 GLYCTKQ8IVS8 523 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 GPR65Q8IYL9 337 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 TMEM105Q8N8V8 129 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 FAM184AQ8NB25 1140 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 DEPTORQ8TB45 409 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 HDAC7Q8WUI4 952 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 ZNF707Q96C28 371 aaPredicted RBP13.47□□□□□ -0.25
VPS16-208ENST00000487461 KIFC3Q9BVG8 833 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 RHOBTB2Q9BYZ6 727 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 NT5C3AQ9H0P0 336 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.47□□□□□ -0.25
VPS16-208ENST00000487461 DPP7Q9UHL4 492 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 KIAA1024Q9UPX6 916 aa13.47□□□□□ -0.25
VPS16-208ENST00000487461 KMT2EQ8IZD2 1858 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 CASTOR2A6NHX0 329 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 RECQL4O94761 1208 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 C1RP00736 705 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 THP07101 528 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 U2AF2P26368 475 aaKnown RBP eCLIP13.46□□□□□ -0.25
VPS16-208ENST00000487461 NUBP1P53384 320 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 TUSC3Q13454 348 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 TDGQ13569 410 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 GNL2Q13823 731 aaKnown RBP13.46□□□□□ -0.25
VPS16-208ENST00000487461 PDIA5Q14554 519 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 NAB2Q15742 525 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 TMEM132AQ24JP5 1023 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 RTP2Q5QGT7 225 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 NT5DC1Q5TFE4 455 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 HASPINQ8TF76 798 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 SMG7Q92540 1137 aaKnown RBP13.46□□□□□ -0.25
VPS16-208ENST00000487461 MYADMQ96S97 322 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 BHMT2Q9H2M3 363 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 PLEKHA4Q9H4M7 779 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 SH2B1Q9NRF2 756 aaPredicted RBP13.46□□□□□ -0.25
VPS16-208ENST00000487461 FAM86C1Q9NVL1 165 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 LRWD1Q9UFC0 647 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 PCDHB6Q9Y5E3 794 aa13.46□□□□□ -0.25
VPS16-208ENST00000487461 TDRD15B5MCY1 1934 aaKnown RBP13.45□□□□□ -0.26
VPS16-208ENST00000487461 H0Y858 1186 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
VPS16-208ENST00000487461 KIF4AO95239 1232 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 IGFBP6P24592 240 aaPredicted RBP13.45□□□□□ -0.26
VPS16-208ENST00000487461 GBP2P32456 591 aaPredicted RBP13.45□□□□□ -0.26
VPS16-208ENST00000487461 PTGDRQ13258 359 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 PPP2R5AQ15172 486 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 IL17AQ16552 155 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 FAM171A1Q5VUB5 890 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 HAUS3Q68CZ6 603 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 ASTLQ6HA08 431 aaPredicted RBP13.45□□□□□ -0.26
VPS16-208ENST00000487461 ELMSAN1Q6PJG2 1045 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 CEP57Q86XR8 500 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 RSAD2Q8WXG1 361 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 ATOH1Q92858 354 aaPredicted RBP13.45□□□□□ -0.26
VPS16-208ENST00000487461 IFT74Q96LB3 600 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 CLSTN3Q9BQT9 956 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 PRKD2Q9BZL6 878 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 DDX19AQ9NUU7 478 aaKnown RBP13.45□□□□□ -0.26
VPS16-208ENST00000487461 IGSF9Q9P2J2 1179 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 NOL7Q9UMY1 257 aaKnown RBP13.45□□□□□ -0.26
VPS16-208ENST00000487461 GDAQ9Y2T3 454 aa13.45□□□□□ -0.26
VPS16-208ENST00000487461 PLXNA3P51805 1871 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 CLUHO75153 1309 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 SF3B1O75533 1304 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPS16-208ENST00000487461 C2orf16Q68DN1 1984 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 NARSO43776 548 aaKnown RBP13.44□□□□□ -0.26
VPS16-208ENST00000487461 NPR3P17342 541 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 CLCN5P51795 746 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 EFNA5P52803 228 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 ATF7IP2Q5U623 682 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 SLC44A3Q8N4M1 653 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 IGSF22Q8N9C0 903 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 FLCNQ8NFG4 579 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 LNX1Q8TBB1 728 aaPredicted RBP13.44□□□□□ -0.26
VPS16-208ENST00000487461 STAMQ92783 540 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 ADPGKQ9BRR6 497 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 TTPALQ9BTX7 342 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 IRF2BPLQ9H1B7 796 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 MFSD1Q9H3U5 465 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 PIDD1Q9HB75 910 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 ZDHHC7Q9NXF8 308 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 EPS15L1Q9UBC2 864 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 DUSP12Q9UNI6 340 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 DENND4AQ7Z401 1863 aa13.44□□□□□ -0.26
VPS16-208ENST00000487461 PP2D1A8MPX8 630 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 E9PMD0 336 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 K7ERI5 159 aa13.43□□□□□ -0.26
VPS16-208ENST00000487461 ADAM12O43184 909 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms