RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 SEL1LQ9UBV2 794 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 PARP2Q9UGN5 583 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 PCDHGC5Q9Y5F6 944 aa11.27□□□□□ -0.61
RNF220-215ENST00000487332 PRRC2BQ5JSZ5 2229 aaKnown RBP11.27□□□□□ -0.61
RNF220-215ENST00000487332 FRMD3A2A2Y4 597 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 HIDE1A8MVS5 230 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 H3BQ06 376 aaPredicted RBP11.26□□□□□ -0.61
RNF220-215ENST00000487332 LINC01565O15544 149 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 LILRB3O75022 631 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 TBCAO75347 108 aaKnown RBP11.26□□□□□ -0.61
RNF220-215ENST00000487332 FAM13AO94988 1023 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 THP07101 528 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 CREMQ03060 361 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 DLX2Q07687 328 aaPredicted RBP11.26□□□□□ -0.61
RNF220-215ENST00000487332 MCM6Q14566 821 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 NOLC1Q14978 699 aaKnown RBP eCLIP11.26□□□□□ -0.61
RNF220-215ENST00000487332 KYAT1Q16773 422 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 RRAGBQ5VZM2 374 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 USP49Q70CQ1 688 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 MAP4K3Q8IVH8 894 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 FAM178BQ8IXR5 827 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 VN1R2Q8NFZ6 395 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 UROC1Q96N76 676 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 PPP1R10Q96QC0 940 aaKnown RBP11.26□□□□□ -0.61
RNF220-215ENST00000487332 PLIN2Q99541 437 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 POP1Q99575 1024 aaKnown RBP11.26□□□□□ -0.61
RNF220-215ENST00000487332 CCDC94Q9BW85 323 aaPredicted RBP11.26□□□□□ -0.61
RNF220-215ENST00000487332 TARS2Q9BW92 718 aaKnown RBP11.26□□□□□ -0.61
RNF220-215ENST00000487332 COLEC11Q9BWP8 271 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 APOL6Q9BWW8 343 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 GBP3Q9H0R5 595 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 TNMDQ9H2S6 317 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 MAGEF1Q9HAY2 307 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 DZANK1Q9NVP4 752 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 CNTN3Q9P232 1028 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 ADAM28Q9UKQ2 775 aa11.26□□□□□ -0.61
RNF220-215ENST00000487332 SF3B1O75533 1304 aaKnown RBP eCLIP11.26□□□□□ -0.61
RNF220-215ENST00000487332 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.25□□□□□ -0.61
RNF220-215ENST00000487332 TRAK2O60296 914 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 CUTAO60888 179 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 PAPLNO95428 1278 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 URODP06132 367 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 IL9P15248 144 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 KCNE1P15382 129 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 GAP43P17677 238 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 LIG1P18858 919 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 OR1G1P47890 313 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 YARSP54577 528 aaKnown RBP11.25□□□□□ -0.61
RNF220-215ENST00000487332 GTF2BQ00403 316 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 POU5F1Q01860 360 aaKnown RBP11.25□□□□□ -0.61
RNF220-215ENST00000487332 DSG1Q02413 1049 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 ELAVL2Q12926 359 aaKnown RBP11.25□□□□□ -0.61
RNF220-215ENST00000487332 ALCAMQ13740 583 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 HSP90AA2PQ14568 343 aaPredicted RBP11.25□□□□□ -0.61
RNF220-215ENST00000487332 ANKRD54Q6NXT1 300 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 FUT10Q6P4F1 479 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 ALKAL1Q6UXT8 129 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 SV2BQ7L1I2 683 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 HAUS6Q7Z4H7 955 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 ADHFE1Q8IWW8 467 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 SUSD6Q92537 303 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 SNX27Q96L92 541 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 CLIC6Q96NY7 704 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 TSPAN18Q96SJ8 248 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 EMILIN2Q9BXX0 1053 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 RHOBTB2Q9BYZ6 727 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 IGFLR1Q9H665 355 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 RXFP1Q9HBX9 757 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 POLD4Q9HCU8 107 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 OLFML3Q9NRN5 406 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.25□□□□□ -0.61
RNF220-215ENST00000487332 MRPL17Q9NRX2 175 aaKnown RBP11.25□□□□□ -0.61
RNF220-215ENST00000487332 CHST7Q9NS84 486 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 SLC38A7Q9NVC3 462 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 CFAP45Q9UL16 551 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 PRG3Q9Y2Y8 225 aaPredicted RBP11.25□□□□□ -0.61
RNF220-215ENST00000487332 HCFC2Q9Y5Z7 792 aa11.25□□□□□ -0.61
RNF220-215ENST00000487332 NPHP3-ACAD11A0A0J9YXS1 232 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 C19orf67A6NJJ6 358 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 SFI1A8K8P3 1242 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 K7ENM7 598 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 CLASP2O75122 1294 aaKnown RBP11.24□□□□□ -0.61
RNF220-215ENST00000487332 PPP1R37O75864 691 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 CSPG5O95196 566 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 CXCL14O95715 111 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 KRT18P05783 430 aaKnown RBP11.24□□□□□ -0.61
RNF220-215ENST00000487332 STAT6P42226 847 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 GLUD2P49448 558 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 CEBPZQ03701 1054 aaKnown RBP11.24□□□□□ -0.61
RNF220-215ENST00000487332 ZP2Q05996 745 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 RAD51AP2Q09MP3 1159 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 E2F4Q16254 413 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 TPRNQ4KMQ1 711 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 SPECC1Q5M775 1068 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 CNNM4Q6P4Q7 775 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 PDXDC1Q6P996 788 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 RBM23Q86U06 439 aaKnown RBP11.24□□□□□ -0.61
RNF220-215ENST00000487332 MYCT1Q8N699 235 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 DDX12PQ92771 950 aa11.24□□□□□ -0.61
RNF220-215ENST00000487332 DNAJC19Q96DA6 116 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms