RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 NAT1P18440 290 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 APEX1P27695 318 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 RGS3P49796 1198 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 TMEM177Q53S58 311 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 OTOP1Q7RTM1 612 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 ZNF483Q8TF39 744 aaPredicted RBP5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 RABGGTAQ92696 567 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 NKD2Q969F2 451 aaPredicted RBP5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 CLIP3Q96DZ5 547 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 MAGEB10Q96LZ2 347 aaPredicted RBP5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 IPO9Q96P70 1041 aaKnown RBP5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 DEPDC7Q96QD5 511 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 GIT1Q9Y2X7 761 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 UBR3Q6ZT12 1888 aa5.43□□□□□ -1.54
SNRNP40-205ENST00000486941 PALLDQ8WX93 1383 aa5.42□□□□□ -1.54
SNRNP40-205ENST00000486941 A0A087X1B8 175 aa5.42□□□□□ -1.54
SNRNP40-205ENST00000486941 INHBCP55103 352 aa5.42□□□□□ -1.54
SNRNP40-205ENST00000486941 INHBEP58166 350 aa5.42□□□□□ -1.54
SNRNP40-205ENST00000486941 RBL2Q08999 1139 aa5.42□□□□□ -1.54
SNRNP40-205ENST00000486941 ZNF575Q86XF7 245 aa5.42□□□□□ -1.54
SNRNP40-205ENST00000486941 CLUHP3Q96NS8 147 aa5.42□□□□□ -1.54
SNRNP40-205ENST00000486941 C4BP0C0L5 1744 aa5.42□□□□□ -1.54
SNRNP40-205ENST00000486941 PKD1L3Q7Z443 1732 aa5.42□□□□□ -1.54
SNRNP40-205ENST00000486941 NCAPD2Q15021 1401 aa5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 TOGARAM1Q9Y4F4 1720 aa5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 EFCAB14O75071 495 aa5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 IRF9Q00978 393 aa5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 C1QL3Q5VWW1 255 aa5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 PIGBQ92521 554 aa5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 RPL10LQ96L21 214 aaKnown RBP5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 TANGO6Q9C0B7 1094 aa5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 DMRT1Q9Y5R6 373 aa5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 WASHC2AQ641Q2 1341 aa5.41□□□□□ -1.54
SNRNP40-205ENST00000486941 NSD3Q9BZ95 1437 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 GOLGB1Q14789 3259 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 ANKRD26Q9UPS8 1709 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 PRLP01236 227 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 PTTG1IPP53801 180 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 NANOS3P60323 173 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 TOB2Q14106 344 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 CC2D1AQ6P1N0 951 aaPredicted RBP5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 GAREM2Q75VX8 874 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 ULK2Q8IYT8 1036 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 LILRB2Q8N423 598 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 C2orf69Q8N8R5 385 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 FOXB1Q99853 325 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 SLC6A15Q9H2J7 730 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 VWA7Q9Y334 891 aa5.4□□□□□ -1.54
SNRNP40-205ENST00000486941 ATP10DQ9P241 1426 aa5.4□□□□□ -1.55
SNRNP40-205ENST00000486941 A0A1W2PRX2 142 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 TRAF5O00463 557 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 PPM1GO15355 546 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 ATP2B1P20020 1258 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 GTF2F1P35269 517 aaKnown RBP eCLIP5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 RABGGTBP53611 331 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 PURAQ00577 322 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 SLC6A3Q01959 620 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 KLHDC10Q6PID8 442 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 LRP10Q7Z4F1 713 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 ANKRD53Q8N9V6 530 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 OR5AN1Q8NGI8 311 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 WDR48Q8TAF3 677 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 AURKAIP1Q9NWT8 199 aaPredicted RBP5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 TMOD3Q9NYL9 352 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 SFMBT1Q9UHJ3 866 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 DENND2AQ9ULE3 1009 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 RBM8AQ9Y5S9 174 aaKnown RBP5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 ADCY9O60503 1353 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 PLEKHG2Q9H7P9 1386 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 KIF13BQ9NQT8 1826 aa5.39□□□□□ -1.55
SNRNP40-205ENST00000486941 ZNF831Q5JPB2 1677 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 UBE2QL1A1L167 161 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 KLRG2A4D1S0 409 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 GRXCR1A8MXD5 290 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 ERVV-2B6SEH9 535 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 GLRX3O76003 335 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 KRT37O76014 449 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 PHKG2P15735 406 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 HSPA6P17066 643 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 MAKP20794 623 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 NR4A1P22736 598 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 HHEXQ03014 270 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 ITPK1Q13572 414 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 CLEC14AQ86T13 490 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 CALML6Q8TD86 181 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 C16orf92Q96LL3 132 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 MRPL4Q9BYD3 311 aaKnown RBP5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 SAE1Q9UBE0 346 aaPredicted RBP5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 POLKQ9UBT6 870 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 ASAP1Q9ULH1 1129 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 XDHP47989 1333 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 IGSF1Q8N6C5 1336 aa5.38□□□□□ -1.55
SNRNP40-205ENST00000486941 MYH14Q7Z406 1995 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-205ENST00000486941 M0R2C6 588 aa5.37□□□□□ -1.55
SNRNP40-205ENST00000486941 RPS6KA4O75676 772 aa5.37□□□□□ -1.55
SNRNP40-205ENST00000486941 HSP90AB1P08238 724 aaKnown RBP5.37□□□□□ -1.55
SNRNP40-205ENST00000486941 ADH4P08319 380 aa5.37□□□□□ -1.55
SNRNP40-205ENST00000486941 PTX3P26022 381 aaPredicted RBP5.37□□□□□ -1.55
SNRNP40-205ENST00000486941 BPIFB4P59827 614 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms