RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 TACC1O75410 805 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 SEC31AO94979 1220 aaKnown RBP9.83□□□□□ -0.84
COL12A1-208ENST00000486533 CCNE2O96020 404 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 RPLP2P05387 115 aaKnown RBP9.83□□□□□ -0.84
COL12A1-208ENST00000486533 CYP3A4P08684 503 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 POU3F3P20264 500 aaPredicted RBP9.83□□□□□ -0.84
COL12A1-208ENST00000486533 ERVK-21P61565 698 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 ASIC1P78348 528 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 MRPS6P82932 125 aaKnown RBP9.83□□□□□ -0.84
COL12A1-208ENST00000486533 SETQ01105 290 aaPredicted RBP9.83□□□□□ -0.84
COL12A1-208ENST00000486533 LRRC63Q05C16 580 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 ITIH3Q06033 890 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 LPIN1Q14693 890 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 FAM160B1Q5W0V3 765 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 PAPD7Q5XG87 772 aaKnown RBP9.83□□□□□ -0.84
COL12A1-208ENST00000486533 MIS18BP1Q6P0N0 1132 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 SV2BQ7L1I2 683 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 ACRBPQ8NEB7 543 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 TRIM58Q8NG06 486 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 CRYGNQ8WXF5 182 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 TOP1MTQ969P6 601 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 ERGIC2Q96RQ1 377 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 TUBGCP2Q9BSJ2 902 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 SUGCTQ9HAC7 445 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 GDAQ9Y2T3 454 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 CDY2AQ9Y6F7 541 aa9.83□□□□□ -0.84
COL12A1-208ENST00000486533 MYH9P35579 1960 aaKnown RBP9.82□□□□□ -0.84
COL12A1-208ENST00000486533 IGLV3-22A0A075B6J6 115 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 TTC26A0AVF1 554 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 ERICH4A6NGS2 130 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 A6NNZ2 444 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 M0R2N6 131 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 LPXNO60711 386 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 ATG7O95352 703 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 ARHGAP25P42331 645 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 SLC26A2P50443 739 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 VAV2P52735 878 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 HTRA4P83105 476 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-208ENST00000486533 TFF2Q03403 129 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 MGAT3Q09327 533 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 TBC1D8BQ0IIM8 1120 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 TMEM62Q0P6H9 643 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 PTPN21Q16825 1174 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 TUBB8Q3ZCM7 444 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 PRR16Q569H4 304 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 BEND6Q5SZJ8 279 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-208ENST00000486533 IER5Q5VY09 327 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 TTI2Q6NXR4 508 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 ABHD15Q6UXT9 468 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 TRMT1LQ7Z2T5 733 aaKnown RBP9.82□□□□□ -0.84
COL12A1-208ENST00000486533 TRAPPC11Q7Z392 1133 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 CCDC60Q8IWA6 550 aaPredicted RBP9.82□□□□□ -0.84
COL12A1-208ENST00000486533 ZNF507Q8TCN5 953 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 CNOT6LQ96LI5 555 aaKnown RBP9.82□□□□□ -0.84
COL12A1-208ENST00000486533 C17orf80Q9BSJ5 609 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 ANKZF1Q9H8Y5 726 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 ZNF302Q9NR11 478 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 GUCA1BQ9UMX6 200 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 LOXHD1Q8IVV2 1947 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 BRWD1Q9NSI6 2320 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 KDM3AQ9Y4C1 1321 aa9.82□□□□□ -0.84
COL12A1-208ENST00000486533 IGKV6D-21A0A0A0MT36 114 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 DHX15O43143 795 aaKnown RBP9.81□□□□□ -0.84
COL12A1-208ENST00000486533 CLSTN1O94985 981 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 PRLRP16471 622 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 COL9A1P20849 921 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 CASP1P29466 404 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 AMPD2Q01433 879 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 IL17AQ16552 155 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 MAN2A1Q16706 1144 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 INF2Q27J81 1249 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 AAK1Q2M2I8 961 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 FBXO47Q5MNV8 452 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 SWSAP1Q6NVH7 229 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 TSHZ1Q6ZSZ6 1077 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 UNC13DQ70J99 1090 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 STAMQ92783 540 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 SECISBP2LQ93073 1101 aaKnown RBP9.81□□□□□ -0.84
COL12A1-208ENST00000486533 CCDC42Q96M95 316 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 CRACR2AQ9BSW2 395 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 TRIM9Q9C026 710 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 FAM107BQ9H098 131 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 TBC1D22BQ9NU19 505 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 RNF14Q9UBS8 474 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 L1RE1Q9UN81 338 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 SAMM50Q9Y512 469 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 PCDHA2Q9Y5H9 948 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 NLRC5Q86WI3 1866 aa9.81□□□□□ -0.84
COL12A1-208ENST00000486533 TCF20Q9UGU0 1960 aaKnown RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 KLRC4O43908 158 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 HBP1O60381 514 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 CCNT1O60563 726 aaKnown RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 SASH3O75995 380 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 GNA14O95837 355 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 GCFC2P16383 781 aaKnown RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 TCP1P17987 556 aaKnown RBP9.8□□□□□ -0.84
COL12A1-208ENST00000486533 PLCG1P19174 1290 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 KLRC1P26715 233 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 CD52P31358 61 aa9.8□□□□□ -0.84
COL12A1-208ENST00000486533 KRT76Q01546 638 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms