RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 ANO3Q9BYT9 981 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 ADAM33Q9BZ11 813 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 ARRDC1-AS1Q9H2J1 176 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 RSAD1Q9HA92 442 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 LMAN1LQ9HAT1 526 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 NCOA5Q9HCD5 579 aaKnown RBP10.99□□□□□ -0.65
SND1-213ENST00000486037 MIOSQ9NXC5 875 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 CHMP5Q9NZZ3 219 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 STK39Q9UEW8 545 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 FBXW11Q9UKB1 542 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 PCDHB2Q9Y5E7 798 aa10.99□□□□□ -0.65
SND1-213ENST00000486037 IGLV3-22A0A075B6J6 115 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 ERICH2A1L162 156 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 TMEM150BA6NC51 233 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 ADAMTS3O15072 1205 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 JAK2O60674 1132 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 CTDNEP1O95476 244 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 TMOD1P28289 359 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 CCR3P51677 355 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 GRM2Q14416 872 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 UBXN11Q5T124 520 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 TANGO2Q6ICL3 276 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 ELMSAN1Q6PJG2 1045 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 PRSS55Q6UWB4 352 aaPredicted RBP10.98□□□□□ -0.65
SND1-213ENST00000486037 NFXL1Q6ZNB6 911 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 MRPL10Q7Z7H8 261 aaKnown RBP10.98□□□□□ -0.65
SND1-213ENST00000486037 PLA2G4DQ86XP0 818 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 KSR1Q8IVT5 923 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 ZNF654Q8IZM8 581 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 CCDC82Q8N4S0 544 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 RSPH1Q8WYR4 309 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 RABGGTAQ92696 567 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 FAM193BQ96PV7 902 aaPredicted RBP10.98□□□□□ -0.65
SND1-213ENST00000486037 SH2D3AQ9BRG2 576 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 GCOM2Q9BZD3 368 aaPredicted RBP10.98□□□□□ -0.65
SND1-213ENST00000486037 CIZ1Q9ULV3 898 aaPredicted RBP10.98□□□□□ -0.65
SND1-213ENST00000486037 CEP131Q9UPN4 1083 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 SMC3Q9UQE7 1217 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 SSX2IPQ9Y2D8 614 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.98□□□□□ -0.65
SND1-213ENST00000486037 NID2Q14112 1375 aa10.98□□□□□ -0.65
SND1-213ENST00000486037 TCHHQ07283 1943 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 CCDC69A6NI79 296 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 ADAM12O43184 909 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 ZBTB43O43298 467 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 OATP04181 439 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 ZNF806P0C7X5 589 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 SKIP12755 728 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 FCARP24071 287 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 GJB2P29033 226 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 CXCL12P48061 93 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 PRKCEQ02156 737 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 DSC1Q08554 894 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 ZNF252P-AS1Q0IIN9 211 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 SLC5A9Q2M3M2 681 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 WWC2Q6AWC2 1192 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 TCEAL6Q6IPX3 200 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 HEATR3Q7Z4Q2 680 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 MICU3Q86XE3 530 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 NSUN7Q8NE18 718 aaKnown RBP10.97□□□□□ -0.65
SND1-213ENST00000486037 ZCCHC14Q8WYQ9 949 aaKnown RBP10.97□□□□□ -0.65
SND1-213ENST00000486037 TCEAL3Q969E4 200 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 MCRS1Q96EZ8 462 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 CEP89Q96ST8 783 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 RBM12Q9NTZ6 932 aaKnown RBP10.97□□□□□ -0.65
SND1-213ENST00000486037 FNIP2Q9P278 1114 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 DNMT3BQ9UBC3 853 aaKnown RBP10.97□□□□□ -0.65
SND1-213ENST00000486037 CACNG4Q9UBN1 327 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 POLIQ9UNA4 740 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 MRPS17Q9Y2R5 130 aaKnown RBP10.97□□□□□ -0.65
SND1-213ENST00000486037 SLC12A7Q9Y666 1083 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 MAST4O15021 2626 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 IGSF10Q6WRI0 2623 aa10.97□□□□□ -0.65
SND1-213ENST00000486037 HELZ2Q9BYK8 2649 aaKnown RBP10.97□□□□□ -0.65
SND1-213ENST00000486037 TICRRQ7Z2Z1 1910 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 NCANO14594 1321 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 GOLGA8AA7E2F4 631 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 IPO5O00410 1097 aaKnown RBP10.96□□□□□ -0.65
SND1-213ENST00000486037 ECI2O75521 394 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 C8AP07357 584 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 CHRNB1P11230 501 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 SFPQP23246 707 aaKnown RBP eCLIP10.96□□□□□ -0.654e-7■■■■□ 19.6
SND1-213ENST00000486037 SMARCA1P28370 1054 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 CDC27P30260 824 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 SREBF1P36956 1147 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 RAB27AP51159 221 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 NOVA1P51513 510 aaKnown RBP10.96□□□□□ -0.65
SND1-213ENST00000486037 PKP1Q13835 747 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 TARBP2Q15633 366 aaKnown RBP10.96□□□□□ -0.65
SND1-213ENST00000486037 RTP2Q5QGT7 225 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 ZNF746Q6NUN9 644 aaPredicted RBP10.96□□□□□ -0.65
SND1-213ENST00000486037 FUT10Q6P4F1 479 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 Q6ZS52 159 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 CATSPER4Q7RTX7 472 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 LONP2Q86WA8 852 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 TMTC2Q8N394 836 aa10.96□□□□□ -0.65
SND1-213ENST00000486037 C12orf50Q8NA57 414 aaPredicted RBP10.96□□□□□ -0.65
SND1-213ENST00000486037 SMG8Q8ND04 991 aaKnown RBP10.96□□□□□ -0.65
SND1-213ENST00000486037 CTCFLQ8NI51 663 aaPredicted RBP10.96□□□□□ -0.65
SND1-213ENST00000486037 PGBD4Q96DM1 585 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms