RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 EMILIN2Q9BXX0 1053 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 PRKAG3Q9UGI9 489 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 CDH22Q9UJ99 828 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 NCOR1O75376 2440 aa19.4■□□□□ 0.7
COL6A1-204ENST00000486023 INPPL1O15357 1258 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 SOD2P04179 222 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 URODP06132 367 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 THP07101 528 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 WEE2P0C1S8 567 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 KCNC3Q14003 757 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 FOXD4L6Q3SYB3 417 aaPredicted RBP19.39■□□□□ 0.69
COL6A1-204ENST00000486023 ZNF568Q3ZCX4 644 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 ARSHQ5FYA8 562 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 GLRA4Q5JXX5 417 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 RARS2Q5T160 578 aaKnown RBP19.39■□□□□ 0.69
COL6A1-204ENST00000486023 SYCE2Q6PIF2 218 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 FOXD4L3Q6VB84 417 aaPredicted RBP19.39■□□□□ 0.69
COL6A1-204ENST00000486023 TMEM184AQ6ZMB5 413 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 USP49Q70CQ1 688 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 TAS1R3Q7RTX0 852 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 CEP120Q8N960 986 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 LRRC15Q8TF66 581 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 KLHL5Q96PQ7 755 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 PAAF1Q9BRP4 392 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 TMEM134Q9H6X4 195 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 TNFSF13BQ9Y275 285 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 PHLPP2Q6ZVD8 1323 aa19.39■□□□□ 0.69
COL6A1-204ENST00000486023 FAM86C2PA6NEL3 165 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 PTGESO14684 152 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 FAM13AO94988 1023 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 CNPP09543 421 aaKnown RBP19.38■□□□□ 0.69
COL6A1-204ENST00000486023 TUSC3Q13454 348 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 PTPAQ15257 358 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 CES5AQ6NT32 575 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 KCTD17Q8N5Z5 321 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 MYCT1Q8N699 235 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 RAD54LQ92698 747 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 BICD1Q96G01 975 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 ZBTB45Q96K62 511 aaPredicted RBP19.38■□□□□ 0.69
COL6A1-204ENST00000486023 POP1Q99575 1024 aaKnown RBP19.38■□□□□ 0.69
COL6A1-204ENST00000486023 REEP2Q9BRK0 252 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 PANK2Q9BZ23 570 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 GPR62Q9BZJ7 368 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 C17orf75Q9HAS0 396 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 TSHZ2Q9NRE2 1034 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 ARHGAP28Q9P2N2 729 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 ANKFY1Q9P2R3 1169 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 C5orf42Q9H799 3197 aa19.38■□□□□ 0.69
COL6A1-204ENST00000486023 HOXB8P17481 243 aaPredicted RBP19.37■□□□□ 0.69
COL6A1-204ENST00000486023 GLUD2P49448 558 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 YARSP54577 528 aaKnown RBP19.37■□□□□ 0.69
COL6A1-204ENST00000486023 HSP90AA2PQ14568 343 aaPredicted RBP19.37■□□□□ 0.69
COL6A1-204ENST00000486023 TPRNQ4KMQ1 711 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 CEP57Q86XR8 500 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 GLYCTKQ8IVS8 523 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 SPIRE2Q8WWL2 714 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 SNX21Q969T3 373 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 USP28Q96RU2 1077 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 HERC2P3Q9BVR0 1158 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 CCDC94Q9BW85 323 aaPredicted RBP19.37■□□□□ 0.69
COL6A1-204ENST00000486023 CDT1Q9H211 546 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 S1PR5Q9H228 398 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 BLOC1S4Q9NUP1 217 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 KCND2Q9NZV8 630 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 LARSQ9P2J5 1176 aaKnown RBP19.37■□□□□ 0.69
COL6A1-204ENST00000486023 TFIP11Q9UBB9 837 aaKnown RBP19.37■□□□□ 0.69
COL6A1-204ENST00000486023 STK39Q9UEW8 545 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 CCDC39Q9UFE4 941 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 KCNG1Q9UIX4 513 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 FBXO2Q9UK22 296 aaPredicted RBP19.37■□□□□ 0.69
COL6A1-204ENST00000486023 ADAM28Q9UKQ2 775 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 IRAK3Q9Y616 596 aa19.37■□□□□ 0.69
COL6A1-204ENST00000486023 CBX2Q14781 532 aaPredicted RBP19.36■□□□□ 0.69
COL6A1-204ENST00000486023 SEZ6Q53EL9 994 aa19.36■□□□□ 0.69
COL6A1-204ENST00000486023 FUT10Q6P4F1 479 aa19.36■□□□□ 0.69
COL6A1-204ENST00000486023 TMC5Q6UXY8 1006 aa19.36■□□□□ 0.69
COL6A1-204ENST00000486023 TMEM161BQ8NDZ6 487 aa19.36■□□□□ 0.69
COL6A1-204ENST00000486023 C1QTNF1Q9BXJ1 281 aa19.36■□□□□ 0.69
COL6A1-204ENST00000486023 ZSCAN16Q9H4T2 348 aaPredicted RBP19.36■□□□□ 0.69
COL6A1-204ENST00000486023 SRPRBQ9Y5M8 271 aaKnown RBP19.36■□□□□ 0.69
COL6A1-204ENST00000486023 C19orf67A6NJJ6 358 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 PI4K2BG5E9Z4 385 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 SLC26A4O43511 780 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 TBCAO75347 108 aaKnown RBP19.35■□□□□ 0.69
COL6A1-204ENST00000486023 SPATA31D3P0C874 917 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 MAPTP10636 758 aaKnown RBP19.35■□□□□ 0.69
COL6A1-204ENST00000486023 DDIT3P35638 169 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 TXLNAP40222 546 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 STK38Q15208 465 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 USP41Q3LFD5 358 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 RRAGBQ5VZM2 374 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 MPZL3Q6UWV2 235 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 SPATA31D4Q6ZUB0 917 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 PPFIBP1Q86W92 1011 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 PALB2Q86YC2 1186 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 RNF135Q8IUD6 432 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 SLC22A17Q8WUG5 538 aa19.35■□□□□ 0.69
COL6A1-204ENST00000486023 RIN2Q8WYP3 895 aaPredicted RBP19.35■□□□□ 0.69
COL6A1-204ENST00000486023 LARP4BQ92615 738 aaKnown RBP19.35■□□□□ 0.69
COL6A1-204ENST00000486023 FBXL18Q96ME1 805 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms