RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 TCF25Q9BQ70 676 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 ADPGKQ9BRR6 497 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 TRIM6Q9C030 488 aaPredicted RBP7.72□□□□□ -1.17
VPS50-218ENST00000485994 ZBP1Q9H171 429 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 S1PR5Q9H228 398 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 IGFLR1Q9H665 355 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 PTPRHQ9HD43 1115 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 DNAJB4Q9UDY4 337 aa7.72□□□□□ -1.17
VPS50-218ENST00000485994 SRPRBQ9Y5M8 271 aaKnown RBP7.72□□□□□ -1.17
VPS50-218ENST00000485994 CITO14578 2027 aa7.71□□□□□ -1.17
VPS50-218ENST00000485994 C5orf42Q9H799 3197 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 VWA3AA6NCI4 1184 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 PP2D1A8MPX8 630 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 HIDE1A8MVS5 230 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 H0YCG3 227 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 PER2O15055 1255 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 LINC01565O15544 149 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 B4GALT5O43286 388 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 ZC3H11AO75152 810 aaKnown RBP eCLIP7.71□□□□□ -1.18
VPS50-218ENST00000485994 TBX10O75333 385 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 BRD1O95696 1058 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 SOD2P04179 222 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 PRKCBP05771 671 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 PLA2G4BP0C869 781 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 SRGAP2BP0DMP2 458 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 IL9P15248 144 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 IBSPP21815 317 aaPredicted RBP7.71□□□□□ -1.18
VPS50-218ENST00000485994 PROZP22891 400 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 ABCD1P33897 745 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 UBA7P41226 1012 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 NPTX2P47972 431 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 NDUFV1P49821 464 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 SMTNP53814 917 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 ITIH3Q06033 890 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 MAPK7Q13164 816 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 CBX2Q14781 532 aaPredicted RBP7.71□□□□□ -1.18
VPS50-218ENST00000485994 PTPAQ15257 358 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 SF3A1Q15459 793 aaKnown RBP7.71□□□□□ -1.18
VPS50-218ENST00000485994 DCAF4L1Q3SXM0 396 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 TPRNQ4KMQ1 711 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 ARSHQ5FYA8 562 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 NT5DC1Q5TFE4 455 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 ANKRD54Q6NXT1 300 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 ALKAL1Q6UXT8 129 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 PPFIBP1Q86W92 1011 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 HDAC7Q8WUI4 952 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 CASP10Q92851 521 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 CALML4Q96GE6 196 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 GAD1Q99259 594 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 POP1Q99575 1024 aaKnown RBP7.71□□□□□ -1.18
VPS50-218ENST00000485994 ACO2Q99798 780 aaKnown RBP7.71□□□□□ -1.18
VPS50-218ENST00000485994 COLEC11Q9BWP8 271 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 C1QTNF1Q9BXJ1 281 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 RHOBTB2Q9BYZ6 727 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 PDZD7Q9H5P4 517 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 RXFP1Q9HBX9 757 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 CD320Q9NPF0 282 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 ENTPD7Q9NQZ7 604 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 CHST7Q9NS84 486 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 LARSQ9P2J5 1176 aaKnown RBP7.71□□□□□ -1.18
VPS50-218ENST00000485994 ODF2LQ9ULJ1 636 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 INPP5FQ9Y2H2 1132 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 HES2Q9Y543 173 aa7.71□□□□□ -1.18
VPS50-218ENST00000485994 LOC730098B7Z3J9 87 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 STX6O43752 255 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 B4GALT3O60512 393 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 GPR37L1O60883 481 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 CLASP2O75122 1294 aaKnown RBP7.7□□□□□ -1.18
VPS50-218ENST00000485994 HIP1RO75146 1068 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 NPTXRO95502 500 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 POMCP01189 267 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 THP07101 528 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 ALADP13716 330 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 PLS3P13797 630 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 AKAP5P24588 427 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 PBX3P40426 434 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 ZNF131P52739 623 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 PEX3P56589 373 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 ZP2Q05996 745 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 GRIK3Q13003 919 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 RESTQ13127 1097 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 DMP1Q13316 513 aaPredicted RBP7.7□□□□□ -1.18
VPS50-218ENST00000485994 SLC39A14Q15043 492 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 NAB2Q15742 525 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 LONRF3Q496Y0 759 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 ATF7IP2Q5U623 682 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 KIAA0319Q5VV43 1072 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 PLPP4Q5VZY2 271 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 SYCE2Q6PIF2 218 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 CYP26C1Q6V0L0 522 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 ZPBP2Q6X784 338 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 EP400NLQ6ZTU2 488 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 TAS1R3Q7RTX0 852 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 CABP7Q86V35 215 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 TMEM173Q86WV6 379 aaPredicted RBP7.7□□□□□ -1.18
VPS50-218ENST00000485994 TMEM161BQ8NDZ6 487 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 VN1R2Q8NFZ6 395 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 SLC22A17Q8WUG5 538 aa7.7□□□□□ -1.18
VPS50-218ENST00000485994 BCL7CQ8WUZ0 217 aaPredicted RBP7.7□□□□□ -1.18
VPS50-218ENST00000485994 ZFP42Q96MM3 310 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms