RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 WNT7AO00755 349 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 SEC24BO95487 1268 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 SPATA31D3P0C874 917 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 GBP2P32456 591 aaPredicted RBP15.18■□□□□ 0.02
SCAF4-206ENST00000485790 CDCA2Q69YH5 1023 aaPredicted RBP15.18■□□□□ 0.02
SCAF4-206ENST00000485790 ASTLQ6HA08 431 aaPredicted RBP15.18■□□□□ 0.02
SCAF4-206ENST00000485790 FUT10Q6P4F1 479 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 SPATA31D4Q6ZUB0 917 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 GSTCDQ8NEC7 633 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 SMG7Q92540 1137 aaKnown RBP15.18■□□□□ 0.02
SCAF4-206ENST00000485790 GPR62Q9BZJ7 368 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 KCNK12Q9HB15 430 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 FBXL21Q9UKT6 434 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 PLXNA4Q9HCM2 1894 aa15.18■□□□□ 0.02
SCAF4-206ENST00000485790 EFEMP2O95967 443 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 PRKCBP05771 671 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 FXR2P51116 673 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCAF4-206ENST00000485790 VCPP55072 806 aaKnown RBP15.17■□□□□ 0.02
SCAF4-206ENST00000485790 TCF15Q12870 199 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 KRT79Q5XKE5 535 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 CEP57Q86XR8 500 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 RNF168Q8IYW5 571 aaPredicted RBP15.17■□□□□ 0.02
SCAF4-206ENST00000485790 TTPALQ9BTX7 342 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 NT5C3AQ9H0P0 336 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 ZDHHC7Q9NXF8 308 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 SNTG2Q9NY99 539 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 KIAA1024Q9UPX6 916 aa15.17■□□□□ 0.02
SCAF4-206ENST00000485790 STK25O00506 426 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 LAD1O00515 517 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 TGM5O43548 720 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 GALR2O43603 387 aaPredicted RBP15.16■□□□□ 0.02
SCAF4-206ENST00000485790 TRAPPC3O43617 180 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 DCAF4L1Q3SXM0 396 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 FAM171A1Q5VUB5 890 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 LILRA6Q6PI73 481 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 PRKD2Q9BZL6 878 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 BHMT2Q9H2M3 363 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 PDZD7Q9H5P4 517 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 RBM19Q9Y4C8 960 aaKnown RBP15.16■□□□□ 0.02
SCAF4-206ENST00000485790 PHLPP2Q6ZVD8 1323 aa15.16■□□□□ 0.02
SCAF4-206ENST00000485790 CCDC169A6NNP5 214 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 PDGFBP01127 241 aaPredicted RBP15.15■□□□□ 0.02
SCAF4-206ENST00000485790 MYBP10242 640 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 RFX1P22670 979 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 U2AF2P26368 475 aaKnown RBP eCLIP15.15■□□□□ 0.023e-12■■■■□ 23.7
SCAF4-206ENST00000485790 YARSP54577 528 aaKnown RBP15.15■□□□□ 0.02
SCAF4-206ENST00000485790 PTGDRQ13258 359 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 LIN9Q5TKA1 542 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 DCLRE1AQ6PJP8 1040 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 DTHD1Q6ZMT9 781 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 FLCNQ8NFG4 579 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 RABGGTAQ92696 567 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 B3GALT6Q96L58 329 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 ZFP37Q9Y6Q3 630 aaPredicted RBP15.15■□□□□ 0.02
SCAF4-206ENST00000485790 KIAA1671Q9BY89 1806 aa15.15■□□□□ 0.02
SCAF4-206ENST00000485790 CASTOR2A6NHX0 329 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 F8W810 466 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 H0Y858 1186 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 ST18O60284 1047 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 RFPL2O75678 378 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 ZMYND10O75800 440 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 HNRNPA1P09651 372 aaKnown RBP eCLIP15.14■□□□□ 0.01
SCAF4-206ENST00000485790 ATF7IP2Q5U623 682 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 GLYCTKQ8IVS8 523 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 C4orf32Q8N8J7 132 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 SNX29Q8TEQ0 813 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 UROC1Q96N76 676 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 RTP3Q9BQQ7 232 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 TCHPQ9BT92 498 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 TOPORSQ9NS56 1045 aaPredicted RBP15.14■□□□□ 0.01
SCAF4-206ENST00000485790 DDX19AQ9NUU7 478 aaKnown RBP15.14■□□□□ 0.01
SCAF4-206ENST00000485790 EPS15L1Q9UBC2 864 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 WNT16Q9UBV4 365 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 GDAQ9Y2T3 454 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 CLUHO75153 1309 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 TECTAO75443 2155 aa15.14■□□□□ 0.01
SCAF4-206ENST00000485790 XYLBO75191 536 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 RECQL4O94761 1208 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 B3GAT3O94766 335 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 CENPBP07199 599 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-206ENST00000485790 ST3GAL1Q11201 340 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 UVSSAQ2YD98 709 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 RTL10Q7L3V2 364 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 SLC44A3Q8N4M1 653 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 KCTD17Q8N5Z5 321 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 PIK3R5Q8WYR1 880 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 BSNDQ8WZ55 320 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 ZNF707Q96C28 371 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-206ENST00000485790 DDX27Q96GQ7 796 aaKnown RBP15.13■□□□□ 0.01
SCAF4-206ENST00000485790 DRC1Q96MC2 740 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 CCDC94Q9BW85 323 aaPredicted RBP15.13■□□□□ 0.01
SCAF4-206ENST00000485790 CCDC113Q9H0I3 377 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 C17orf75Q9HAS0 396 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 DUSP12Q9UNI6 340 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 TNFSF13BQ9Y275 285 aa15.13■□□□□ 0.01
SCAF4-206ENST00000485790 WDFY4Q6ZS81 3184 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 PTGESO14684 152 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 PAPLNO95428 1278 aa15.12■□□□□ 0.01
SCAF4-206ENST00000485790 LAMP2P13473 410 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms