RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 LETM2Q2VYF4 491 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 KRT71Q3SY84 523 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CAVIN4Q5BKX8 364 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 FAM26FQ5R3K3 315 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 INTS5Q6P9B9 1019 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 BTNL9Q6UXG8 535 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 BRINP3Q76B58 766 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 IRF2BP2Q7Z5L9 587 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 PIGWQ7Z7B1 504 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 FMNL3Q8IVF7 1028 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 KLHL7Q8IXQ5 586 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 REXO1Q8N1G1 1221 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 METTL13Q8N6R0 699 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CEP120Q8N960 986 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CCDC26Q8TAB7 109 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 OLIG1Q8TAK6 271 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 HELQQ8TDG4 1101 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 TBCKQ8TEA7 893 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 GTF3C2Q8WUA4 911 aaPredicted RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 LMBR1Q8WVP7 490 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CUL5Q93034 780 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 MAGOHBQ96A72 148 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 EEF2KMTQ96G04 330 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 HES6Q96HZ4 224 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 FAXDC2Q96IV6 333 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CDK5RAP3Q96JB5 506 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 FAM84BQ96KN1 310 aaPredicted RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 ANKRD27Q96NW4 1050 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 PLIN2Q99541 437 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 PACSIN1Q9BY11 444 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 RAB17Q9H0T7 212 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 EPB41L4BQ9H329 900 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 KCTD10Q9H3F6 313 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 KCNMB3Q9NPA1 279 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 PPANQ9NQ55 473 aaKnown RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 BATF3Q9NR55 127 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 ZDHHC18Q9NUE0 388 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CCDC87Q9NVE4 849 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 BSDC1Q9NW68 430 aaPredicted RBP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 USP21Q9UK80 565 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 PCDHA2Q9Y5H9 948 aa5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.08□□□□□ -1.6
SMARCC1-206ENST00000485737 CCDC88AQ3V6T2 1871 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 SPATA31A1Q5TZJ5 1347 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 PITPNM2Q9BZ72 1349 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 SMCO2A6NFE2 343 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 CCDC169A6NNP5 214 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 DCDC2CA8MYV0 355 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 C9orf172C9J069 976 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 KRIT1O00522 736 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 DAPK3O43293 454 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 CEP104O60308 925 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 AGTP01019 485 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 TMEM253P0C7T8 217 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 PDHBP11177 359 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 PCSK2P16519 638 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 HSPA6P17066 643 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 MPSTP25325 297 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 TMOD1P28289 359 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 SOX18P35713 384 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 TECP42680 631 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 ZNF131P52739 623 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 CLNS1AP54105 237 aaKnown RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 IRX1P78414 480 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 ATP2B2Q01814 1243 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 ICA1Q05084 483 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 DHX34Q14147 1143 aaKnown RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 ZNF268Q14587 947 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 TCEAL1Q15170 157 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 BMT2Q1RMZ1 405 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 TNFAIP8L3Q5GJ75 292 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 SOGA3Q5TF21 947 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 KRT79Q5XKE5 535 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 SPTY2D1Q68D10 685 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 DUPD1Q68J44 220 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 MFSD5Q6N075 450 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 SHISA2Q6UWI4 295 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 ZNF571Q7Z3V5 609 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 ZNF438Q7Z4V0 828 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 FRMD5Q7Z6J6 570 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 NT5DC3Q86UY8 548 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 COL23A1Q86Y22 540 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 ANKS4BQ8N8V4 417 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 FAM133AQ8N9E0 248 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 OR2W6PQ8NHA6 318 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 NEK9Q8TD19 979 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 SNX29Q8TEQ0 813 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 UBLCP1Q8WVY7 318 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 EDEM1Q92611 657 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 SPACA7Q96KW9 195 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 NAP1L3Q99457 506 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 FMO2Q99518 471 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 NAP1L4Q99733 375 aaKnown RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 TMEM47Q9BQJ4 181 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 MXD3Q9BW11 206 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 NSRP1Q9H0G5 558 aaKnown RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 DDX47Q9H0S4 455 aaKnown RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 STMN4Q9H169 189 aaPredicted RBP5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 CARD9Q9H257 536 aa5.07□□□□□ -1.6
SMARCC1-206ENST00000485737 ADAM7Q9H2U9 754 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms